Quercus lobata (valley oak): 115952860
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Entry
115952860 CDS
T07350
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
qlo01009
]
115952860
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qlo03021
]
115952860
Enzymes [BR:
qlo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
115952860
Protein phosphatases and associated proteins [BR:
qlo01009
]
HAD phosphatases
Fcp/Scp phosphatases
115952860
Transcription machinery [BR:
qlo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
115952860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
115952860
NCBI-ProteinID:
XP_030926051
UniProt:
A0A7N2M490
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Position
7:26729551..26736419
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AA seq
663 aa
AA seq
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MAKDQSISLKDGVYKLQLSLLEGISDESHLFAAGSLMTRSDYEDVVTERSITNLCGYPLC
CNSLPSDRPRKGRFRISLKEHKVYDLQETYMYCSSSCAVNSQAFAKSLQDERCSVVNSEK
LNEVLRLFGNTSLDSEGNLGKNGDLGLSGLKIQEKKEIKAGEVSLEQWIGPSNSIEGYVP
QRDHSSNPSPSKNRKEGSKVNNTMSSGKKDFHISEMDFMSSIITEDEYSVSKMPSGSTET
ASNTKFKEPKEKMSYMDLDGQLSTLENPPALAKNGSEWKSSGSIGEKSKIIKKDDPGIQE
VPSASNPCQTSFNSSTAEAEEEVQAEKVAKSSKIIIKSSLKPSGAKKLSRSVTWADEKVD
GTGSGNLCEFSDGENKESHEMLGSTDVGDNDDMLRFASAEAVAMALSEAAEAVASGEFDV
TDAVSEAGIIILPHSHDADEGELMEDGDLLEPEPAPLKWPTKPGIPQSDFFDLEDSLYDP
PPEGFGLSLSPFATMWMALFAWITSSSLAYIYGRDESLHEEYLSVNGREYPCKITLADGR
STEIKQTLAGCLARALPGLSADLRLPTPISTLEQGMGRLLDTMTFVDALPAFRMKQWQVI
VLLFIEALSVCRIPALTPHMTNRRMLMQKVLDGAQIALDEYEVMKDLVIPLGRAPHFSSQ
SGA
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggatcaatcaatctctctgaaagatggtgtctacaaattgcaactttccctc
cttgaaggcattagtgatgaaagccacctttttgctgctggatctctgatgacacgcagt
gactatgaagatgttgtgactgagcgttcaattacaaacctctgtggttaccctttgtgc
tgcaattctctgccctctgatcgccctaggaagggccggtttcgcatttccttgaaggaa
cacaaggtttatgatctgcaggagacatacatgtattgctcttcaagttgtgctgttaac
agccaagcttttgctaagagcttgcaagatgagagatgctcagttgtaaattcagaaaaa
cttaatgaggttctgagattgtttgggaatacgagtttggattctgaggggaatttagga
aagaatggagatttaggattgtctggcttgaagattcaggaaaaaaaagaaatcaaggca
ggggaagtgtctctggagcagtggattggtccatcaaattcaattgaaggttatgttcca
cagagagaccatagttccaatccttcaccttccaaaaatcgcaaagaagggtccaaagtt
aacaataccatgtcgagtggtaaaaaagacttccatattagtgagatggacttcatgagt
tctataatcactgaagatgaatatagtgtctcaaaaatgccatcaggttcaacagagact
gcttccaacactaaatttaaagaaccaaaagaaaaaatgagttacatggatttagatggt
caactctccacattggaaaacccacctgctctcgcaaagaatggttctgaatggaaatca
agcggatcaattggggaaaagagtaaaataataaaaaaggatgatcctggtatacaagag
gtgccttcagcatcaaatccctgccaaactagtttcaattcaagtactgcagaagcagaa
gaggaagtccaagctgagaaagtggccaaatcaagtaaaataataatcaaatcctctctt
aaaccttcaggtgctaagaagcttagtcgctctgttacctgggctgatgagaaagttgat
ggcactgggagtggaaatctttgtgagtttagtgatggggaaaataaagaaagtcatgag
atgttaggcagtacagatgtgggagataatgatgatatgctacgctttgcatcggctgaa
gctgtggcaatggcattgagcgaggcagcagaagctgttgcttctggtgaatttgatgtc
actgatgctgtgtctgaagctggaattattatattgccacattcccatgatgctgatgaa
ggggagttgatggaagatggtgatctgcttgaaccagaacccgctcctttgaagtggcca
acaaagcctggaattccacaatccgattttttcgaccttgaagactcgttgtatgaccct
ccgccagagggttttggtttaagtttgtctccttttgcgacaatgtggatggctctcttt
gcgtggataacatcgtcttccttggcttatatatatgggagggacgaaagtcttcatgaa
gaatatctatcagtaaatgggagggagtacccctgtaagattaccttggcagatggtcgt
tcaactgaaatcaagcaaacgcttgctggttgtcttgctcgggctttgcctggactaagt
gctgatctaagactgccaacaccaatttctactttggagcaaggaatggggcgcttgttg
gatacaatgacttttgttgatgcacttccagctttcagaatgaaacaatggcaagtgatt
gttcttctgttcattgaagctctctccgtctgtaggatccctgcacttaccccacacatg
actaataggaggatgttgatgcagaaggtgttggatggcgcccagatagctttggacgaa
tacgaggttatgaaggatctcgtgattccacttggcagagcacctcatttctcatctcaa
agtggagcttga
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