KEGG   Quercus lobata (valley oak): 115952926
Entry
115952926         CDS       T07350                                 
Name
(RefSeq) serine/threonine-protein phosphatase PP1-like
  KO
K06269  serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    115952926
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:qlo01009]
    115952926
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:qlo03021]
    115952926
   03019 Messenger RNA biogenesis [BR:qlo03019]
    115952926
   03041 Spliceosome [BR:qlo03041]
    115952926
Enzymes [BR:qlo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     115952926
Protein phosphatases and associated proteins [BR:qlo01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    Catalytic subunits
     115952926
Transcription machinery [BR:qlo03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     115952926
Messenger RNA biogenesis [BR:qlo03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     115952926
Spliceosome [BR:qlo03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    115952926
SSDB
Motif
Pfam: Metallophos STPPase_N
Other DBs
NCBI-GeneID: 115952926
NCBI-ProteinID: XP_030926145
LinkDB
Position
7:30532200..30535034
AA seq 301 aa
MDGLDGLIERLLEGRKSRGKKIQLAESEIRQLCVTAKEVFLRQPILLELEAPVNVCGDIH
GQFPDLLRLFEYGGFPPHANYLFLGDYVDRGKQSIETICLLLAYKIKYPDNFFLLRGNHE
CASINRIYGFYDECKRRFSVRLWKIFTESFNCLPVAAVIDEKILCMHGGLSPEMERLDQI
RAIERPVDVPDQGLLCDLLWADPDRDIKGWGENDRGVSYTFGADKVTEFLKKHDLDLICR
AHQVVEDGYEFFAERQLVTIFSAPNYCGEFNNAGALMSVDASLLCSFQILKPWKGKTAHL
E
NT seq 906 nt   +upstreamnt  +downstreamnt
atggatggattggatgggctgatagagaggctgttggaaggaaggaagagtagagggaaa
aagattcagcttgcagagtcggaaatccgccaactttgcgttactgccaaggaagtcttc
ctcaggcagcctattcttcttgaattagaggctcccgttaatgtttgtggtgacatacat
ggtcaatttccagacctgttgcgactgtttgagtatggtggttttccaccacatgcaaac
tacctgttccttggagactatgttgacagaggaaaacaaagcatagagactatatgcctt
ctgcttgcttacaaaatcaagtaccctgacaactttttcctccttcgaggaaaccatgaa
tgtgcatctatcaacagaatctatggattctatgatgagtgcaagcgccgcttcagtgtc
cgtctctggaagatatttactgaatccttcaattgtttgcccgtagctgcagtgattgat
gaaaaaatcttgtgtatgcatggtgggctttcaccagaaatggagagattggatcagata
cgagctatagaaaggccagttgatgttccagaccaggggctcttgtgtgacctcctttgg
gctgatccagacagagacattaaagggtggggtgagaatgataggggtgtttcctatacc
tttggagctgacaaggtgactgagttcttgaagaaacacgatcttgatctcatatgccgt
gctcaccaggtggttgaagatggttacgaattctttgcagagaggcagctggttaccata
ttttcagcaccaaactattgtggagaatttaataatgcgggtgccctgatgagtgtggat
gcaagcttgctttgttcgtttcagattctcaaaccatggaaagggaaaacagcacatctg
gaataa

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