Quercus lobata (valley oak): 115953060
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Entry
115953060 CDS
T07350
Name
(RefSeq) E3 ubiquitin-protein ligase RHF2A-like
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qlo04121
]
115953060
Enzymes [BR:
qlo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115953060
Ubiquitin system [BR:
qlo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115953060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-RING_Vps41
RING_XB3-XBAT31
zf-RING_6
zf-C3HC4_3
zf-C3HC4_4
zf-Nse
Motif
Other DBs
NCBI-GeneID:
115953060
NCBI-ProteinID:
XP_030926397
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All DBs
Position
7:26685808..26691225
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AA seq
387 aa
AA seq
DB search
MEVPEMEEPKPESHLTSAAAFVEGGIQPACDDACSICLEDFSESDPSTVTTCKHEFHLQC
ILEWCQRSSQCPMCWQPISLKDSTSQELLEAVERERSFRVTPPRNATIFHHPTLGAFELQ
HLPVGANDADLEERIIQHLAAAAAMGRAHHIGRRDGHRGRSSAHGRPHFLVFSTHPGGPP
GPVSASGGDNEPVAISVASPSTPLASGGDEPSQQVPHFPSVHTDHVSSPASGPTFLPTNR
QGISFSNRSPALHSSPPNQDGAGPSDLQSFSESLKSRFNAMSMRYKESISKSTRGWKERL
FSRNTSMTDIGSDVPREVNAGIAGVSHMMERLETRENSSANPASVANHVGDFSVTEQNNQ
NIAETHGESPLNDSNQPASCAASSASG
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggaggttccggagatggaggagccaaagcctgaaagtcatttgacatcagctgcagcc
tttgtggaagggggaatacaaccagcctgtgacgatgcttgcagcatatgccttgaggat
ttttctgaaagtgatccatcaacggtgactacttgcaagcatgaatttcacctccagtgc
atccttgaatggtgccagagaagctcccagtgtcccatgtgttggcaacctattagccta
aaggattctaccagtcaagaattgcttgaggcagtggaacgagagaggagctttagggtt
actccaccaagaaatgccactatatttcatcatcccacccttggtgcttttgaattgcag
catttaccggtaggtgctaatgatgctgaccttgaagagcgtataatccagcacttggca
gctgctgctgcaatgggaagggcccaccacattggtaggagggatggtcacagaggtcga
tcatctgcccatggtcgaccacactttttggtattctccactcatcctggtggacctccc
ggtcccgtttctgcctctggaggggacaatgagccagttgcaattagtgtagctagtcca
tcgaccccgcttgcatctggtggggatgaaccatcacagcaggtcccacattttccttca
gttcatactgatcatgtttcttcaccagcatctggacctactttcctgcctacaaatcgt
caaggaatttcctttagtaatcggagccctgctctacattcctcaccaccaaatcaagat
ggagcaggaccgtcagatcttcagtcattttcagagtctctgaaatctagatttaatgct
atgtcaatgagatacaaagagtcaatttcaaagagtaccagagggtggaaggagaggctt
ttctctcgtaacacttccatgacggatattggctctgatgttccgagagaagtgaatgca
ggaattgctggtgtatctcatatgatggaacgccttgagaccagagaaaatagtagtgcc
aacccagcctctgtagcaaatcatgtaggcgatttttctgttacggagcagaacaaccag
aacattgcagagactcatggagaaagccctttgaatgacagcaatcaacctgcttcttgc
gctgcaagttcagcttcaggttaa
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