Quercus lobata (valley oak): 115953093
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Entry
115953093 CDS
T07350
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qlo04131
]
115953093
04121 Ubiquitin system [BR:
qlo04121
]
115953093
Enzymes [BR:
qlo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115953093
Membrane trafficking [BR:
qlo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
115953093
Ubiquitin system [BR:
qlo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115953093
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4
zf-ANAPC11
zf-RING_5
DUF7129
zf-Nse
CxC4
DUF1272
Rad50_zn_hook
Zn_ribbon_IFT122_C
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
115953093
NCBI-ProteinID:
XP_030926438
UniProt:
A0A7N2M339
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All DBs
Position
7:complement(13848976..13852964)
Genome browser
AA seq
311 aa
AA seq
DB search
MSSGRETHWCYRCSRRVRLRGRDGACPSCNGGFVQELEDMMRGSPFDLFGLDIDEDRDRS
LGLMEAFSAFMRQRLADRSRGHDIRARSDAVPEHAPGFGPLLIFGGQIPFRLSGNGGVEA
LFNGTPGIGLTRGNAGDYFIGPGLEELFEQLSANDRRGPPPASRSSIDAMPTIKITQKHL
RSDSHCPVCKDKFEMGSEARQMPCNHMYHTDCIVPWLVQHNSCPVCRQELPPQGSSSGRS
SNSRSRSNNYSGNADGRENSRETQGRRNPFSYLWPFRSSTSSSNHNGAAGSSSPTIHESN
EMGYSGWPFDY
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtggcagagaaacccattggtgttaccgctgcagccggcgagttcgactgcgc
ggacgagatggagcctgccccagctgtaatggaggatttgttcaagaacttgaagatatg
atgcgtggcagcccatttgatttatttggactggacattgatgaagatcgcgataggagt
ttagggcttatggaagctttctcagcttttatgaggcagcgattggcagacagaagccgt
ggacatgatatcagggcaagatcagatgcagttccggaacatgctcctggttttggtcct
ttgctgatctttggtggccaaattccttttaggttgtctggaaatggtggagttgaagct
cttttcaatggaactcctgggattggtcttacacggggtaatgctggtgactatttcata
ggtcctggactggaagagctgtttgaacagctttcggctaatgatcggcgaggccctccc
ccagcatctagatcttcaattgatgcaatgccaactattaagatcacacagaagcatctt
cgttccgattcacactgtcctgtttgcaaagataaatttgagatggggtctgaagcaagg
caaatgccgtgtaatcatatgtatcacacagattgtattgtcccatggctagtccagcac
aactcatgccctgtatgccgccaagaactgccaccacaaggatcgagtagtggccgtagc
tcaaatagtcgaagtagaagcaacaactatagtggtaatgccgatggaagggaaaatagt
agggagactcaaggaagaaggaacccattctcttatttgtggccattccgctcatctact
tctagctctaatcataatggagctgctggaagcagctctccgactatccatgaaagcaac
gagatgggttattcaggatggccttttgactattag
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