Quercus lobata (valley oak): 115953107
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Entry
115953107 CDS
T07350
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B-like
KO
K15559
regulator of Ty1 transposition protein 103
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qlo03021
]
115953107
Transcription machinery [BR:
qlo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
115953107
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CID
CREPT
CTK3
TEX13
DAHL
Motif
Other DBs
NCBI-GeneID:
115953107
NCBI-ProteinID:
XP_030926469
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All DBs
Position
7:15981276..16014788
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AA seq
543 aa
AA seq
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MSNDEFNGQILVEKLSKLNNSQQSIESLSRWCVTHRKKAKQIVETWDKLFNSSQREQRVS
FLYLANDILQNSRRKGSEFVNEFWKVLPAALKLVYENGDEHGKKVVTRLVDIWEERKVFG
SRGRSLKDEMLAKNPPPLSVSNGKSSNLIKIVKRDANSVRIKLAVGGLPEKILTAFQSVL
DEHSTEEATLSKCSASVRHVGKIEEVVESNLIQGNQQGASVVDELQEQENILQQCVGQLE
SAEATRTALISQLKEALQDQESMLEYIRSQLQVARGQIEQASNVRKRLASPPIPSTLTST
MNATTEATRVVEHNMPQPVAPFVPLRNSEDENKKAAAAAVAAKLAASASSAQMLTSVLSS
LVAEEAASMNGSIISTGFSSGLPMFSPEKRPKLEKPLPVSDVSSSDVSSTTYFTPLQQQS
LTNVPPAPSTSMQPISQTNQMQSPFAALPPPPPPPPPLSPATPPTSQYVQSAGMVVMPYG
YGANTLPPPPPLPPHVSMSMARPGPQPSGQQQQQSATGGFYRPPGIGFYGQGHQPTTPPV
HRQ
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgacgaatttaatggacagatattagttgagaaattatcaaaactcaacaat
tcgcaacaaagcattgagtctttgtcccgttggtgtgtcactcaccggaagaaggcaaaa
caaattgttgaaacatgggataagcttttcaactcttctcagagagagcagcgtgtttct
tttctgtatttggctaatgacattttgcaaaatagtaggcgaaagggcagtgagtttgtg
aatgaattttggaaagttcttcctgcagctctcaagcttgtttacgaaaatggtgatgag
catggaaagaaagtggtaaccagactggttgacatatgggaagaaaggaaggtttttggt
tctcgagggcggagtcttaaagatgaaatgctggctaagaaccctcctcctctgtctgtg
agcaatggaaagagttcaaatcttatcaagatagtgaagagggatgcaaactctgttaga
attaaattggctgttggaggtcttccagagaaaatactgactgcgtttcaatctgtactt
gatgaacattcaactgaagaagctacgttaagcaagtgtagtgcttctgtacgtcatgtg
ggtaaaattgaggaagttgttgaaagtaacttaatacaaggaaatcagcaaggagcttct
gtggtggatgagctgcaagaacaggaaaatatacttcagcaatgtgttggacaacttgag
agtgcagaggcaactaggactgccttgatttcccaacttaaagaagcacttcaggaccaa
gaatcaatgctggagtatattcgcagtcagttgcaagttgcccggggccagattgagcag
gcaagtaatgtgaggaagaggctagcatcaccccctattcctagtactctgaccagcacc
atgaacgctacaacagaggcaacaagggttgtagagcacaatatgcctcagcctgtggct
ccttttgtgccactcagaaattctgaagatgagaacaagaaagcagctgctgccgctgtt
gctgctaagcttgctgcctctgcatcgtctgcacagatgcttacatctgttctttcttcc
cttgttgcagaagaagctgcctccatgaatggaagcataatttcaactggatttagttca
gggctaccaatgttctctccagaaaaacggcccaaacttgagaaaccactgcctgtttct
gatgttagcagttctgatgtcagcagcacaacctattttacccctctacaacaacaatct
ctgactaatgtgccaccagcaccatctactagcatgcaacccatttcccaaaccaaccag
atgcaaagtccctttgcagctctaccaccaccgccacctccaccaccacccttatctcct
gcaacaccacctacgagtcagtatgtccaatctgctggtatggttgtgatgccttatggg
tatggagcaaatactctaccacctccacctcctcttcctccacatgtttcaatgagtatg
gcaaggcctggtccccagccatcaggacagcaacagcaacagtcagctactggaggattt
tatcggccaccaggtattgggttctatgggcaaggtcatcagccaacaacacctccagtt
catcgacagtga
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