Quercus lobata (valley oak): 115953143
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Entry
115953143 CDS
T07350
Name
(RefSeq) chromatin-remodeling ATPase INO80 isoform X1
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115953143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
qlo03036
]
115953143
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
115953143
INO80 complex (yeast)
115953143
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
115953143
NCBI-ProteinID:
XP_030926528
LinkDB
All DBs
Position
7:complement(3742007..3754682)
Genome browser
AA seq
1539 aa
AA seq
DB search
MEHRRQSKDSHSYSNLFNLESLVNFQLPQEDDDFDYYGNSSQDESRGSQGGVNLKHGNGV
MRERELGLLKKRRQGENSEDEEDSYYGTRITEERYRSMLGEHIQKYKRRFKDSSASPAST
RMGISVPRSNMGLKARKLGNEHRGALHEVESTSDWLNDINPQKQGNYHEADFSPLNGTER
TTYEPAFVDIGDGITYKIPPTYDKVAASLNLPSFPDIQVEEFFLKGTLDLGSLASMMTNN
NKFGPRSQAGMGEPQPQYESLHARLKALSASKSPQKFNLKVSDMNSSIPEGAAGNIKRSI
LSEGGVLQVYYVKVLEKGDSYEIIERALPKKPKVKKDPAVIEREEMEKIGKVWANIVKKD
LPKHHRIFTAFHRKQLIDAKRFVESCQKEVKMKMGRSHKLMKGAAIRTRKLARDMLLYWK
RVDKEMAEVRKREEREAAEALRREQELREAKRQQQRLNFLIQQTELYSHFMQNKSNAQPS
EVLPVGDENLNDEEVVLSSSDAVPDEEVDPEEAELKKEALRAAQDAVSKQKKLTSAFDNE
CLRLRQASESETYPPEVAGASNIDLHNPTTMPVTSTVQTPQMFKGSLKEYQLKGLQWLVN
CYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWNDEINRFCP
DLKTLPYWGGLQDRTVLRKKIKPKDLYRREAGFHILITSYQLLVSDEKYFRRVKWQYMVL
DEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNE
WFSKGIENHAEHGGTLNEHQLNRLHSILKPFMLRRVKTDVISELTRKTEVTVHCKLSSRQ
QAFYQAIKNKISLAELFEGNRGHLNEKKILNLMNIVIQLRKVCNHPELFERNEGRTYLHF
GEIPNSLLPPPFGELEDVHYAGGHNPITYKIPKLVHEEITHSSETLFTAVGRGVCRESFH
RLFNIYSPENVYRSIFLREDNSDGLSFERRTFGFTRLMDLSPSEVTFLATSSFMERLLFS
VMRWDQHFLDGLIESLMETMDDDPECSYLERGKVRAVARMLLMPSRSNTNLLRSKYATGP
GDAPFEALVVPHEDRFLSNSRPLHSAYTYIPRVRAPPVGAHCSDRNFAYKMSEELHDPWI
KRMFIGFARTSDCNGPRKPVGPPHHLIQEIDSELPVSQPALQLTYKILGSSPPTRSFDPA
KLLTDSGKLQTLDILLKRLRADNHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIT
DRRDMVRDFQHRNDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG
QTKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDLLAPEDVVSLLLDDAQL
EQKLREIPLQVKDRQKKKQSTKGIRVDAEGDASLEDLTNAGSQGTGPEPSPDPEKAKSSN
KKRRAASDKQAPSKQRNPQNVTSPMDYELDDPLQNSDPQAQKPKRPKRPTKSVNENLQPA
FTGTPTVVSEQTHYLPVNELGSGGFRAGQDISQHTNSFT
NT seq
4620 nt
NT seq
+upstream
nt +downstream
nt
atggaacacaggagacaatccaaggactcgcattcctactcgaatctcttcaatcttgag
tctttggtgaactttcaacttccacaagaggatgatgattttgattattatgggaatagt
agtcaggatgagagcagaggtagccaaggtggagtgaatttgaaacacggtaacggggtt
atgcgtgaaagagaattgggtttgttgaagaaaaggaggcagggtgaaaatagtgaggac
gaggaggatagttattacgggacacgcattacagaggagagatatcgatcaatgcttgga
gaacacattcagaagtacaagaggaggttcaaggattcctcagcaagtcctgcatcaacc
aggatgggaatctctgttccaaggagtaatatgggtttaaaagctaggaaactagggaat
gagcatcgaggagcactacatgaagttgaatccacgtccgactggctcaatgatattaat
cctcaaaaacaagggaactatcatgaagcagatttttcaccgctaaatggcactgaaaga
acaacctatgaacctgcttttgtggatattggagatggtatcacgtataagattcctcca
acttatgataaggtggcggcatcactgaacttgccaagctttccagatattcaggtggag
gaattttttttaaagggtacattggatctggggtccttggcatcaatgatgacaaataat
aataagtttgggcctagaagccaggcaggaatgggggagcctcagccccagtatgaatca
cttcatgcaagattaaaggccttgtcagcttctaaatcgccccaaaagttcaacctcaaa
gtttctgatatgaattcctccattccagagggggcagctggaaacataaagcgatctatt
ttgtccgagggtggcgttttgcaggtttactatgtgaaggttttggagaaaggagactca
tatgagatcattgaacgggctctgcccaagaagcccaaggtaaagaaagaccctgctgtg
attgaaagggaggaaatggagaagatagggaaagtgtgggcaaacattgtaaagaaagac
ctaccaaagcatcacaggatttttacagcttttcaccgaaagcaactaattgatgccaag
aggttcgtagagagctgtcaaaaagaggtgaaaatgaagatgggcagatcgcataaactg
atgaagggtgctgcgattcgcactaggaaattagctcgagacatgctgctgtattggaag
cgagtagataaagagatggcagaagtaaggaaaagagaggagagagaagctgctgaagct
ctgaggcgcgaacaagagctacgagaagcaaagagacaacagcaaaggctcaattttctt
atacaacaaacagaactctacagtcattttatgcaaaacaagtcaaatgcacagccctct
gaagttttgcctgtgggagatgaaaatctaaatgacgaagaagtagttctgagctcttca
gatgctgtacctgatgaggaagtagatcctgaggaggctgaattgaagaaggaagccttg
agagctgctcaagatgcagtttctaagcagaaaaagttaacaagtgcatttgataatgaa
tgtttgagactgcgacaggcttctgaatctgagacttatccacctgaggttgcaggagct
agtaacatagatttacataaccccactacaatgcctgtaacatcaacagttcagacaccg
cagatgtttaaaggttcccttaaagaatatcagctaaaaggccttcagtggctagttaat
tgttatgagcagggtttaaatggcatacttgctgatgagatgggccttggaaagaccatc
caggccatggcatttttggctcatttggcagaggaaaaaaatatatggggcccttttttg
gttgttgctccagcttctgtattgaataactggaatgatgaaattaatcgtttctgccct
gacttgaaaactcttccatattggggtgggcttcaagatcgaactgtacttaggaaaaag
atcaaacccaaggacctgtaccgcagggaagctggatttcacattctcattaccagctac
cagctgttagtgtctgatgagaagtactttcggcgtgtgaaatggcaatacatggtgtta
gatgaagcccaggcaatcaaaagttcgaacagtataagatggaagacactgcttagcttc
aattgtcggaaccgattgctgctgactggtacacctatccagaataatatggcagagttg
tgggcccttttgcattttattatgccaaccttatttgacagccacgaacaatttaatgag
tggttttcaaaaggaatcgagaaccatgcagagcacgggggtactttgaatgagcaccag
cttaacagattgcattcaattctaaagccttttatgctgcgaagagttaaaacagatgta
atttctgagctgaccaggaaaactgaggttacagtgcattgcaagttgagttctcgccag
caagctttttatcaggctattaagaacaagatatctcttgccgagttgtttgagggcaat
cgtgggcatcttaatgagaagaaaatactaaatttaatgaatattgtcattcagctgaga
aaggtgtgtaatcatccagagttgtttgaaaggaatgagggaagaacatacctccacttt
ggggagatcccaaattctcttctgccccctccctttggggagttggaggacgtgcactat
gcaggaggtcacaatcctataacatacaagataccgaaactagttcatgaagaaattacc
catagttcggaaactcttttcacagcagttgggcgtggtgtctgcagagaatcttttcac
agactcttcaatatatactcccccgaaaatgtctatcgatctatattcctgcgagaggat
aattcagatggattatcttttgaaagaagaacttttggttttacacgtttgatggatctg
tccccgtctgaggttacatttttggctactagctcttttatggagcgactactgttttct
gtaatgagatgggaccagcacttcttggatggactcatagaatcacttatggaaaccatg
gatgatgaccccgaatgcagttaccttgagagggggaaagtgagagcagttgcgcggatg
ttactgatgccatcaagatctaatacaaacttactgcgaagtaaatatgcaacggggcct
ggagatgctccatttgaggctttagttgtccctcatgaggacaggtttctatccaatagt
aggcctcttcattcagcatacacatatatcccgagagttagagctccaccagttggtgct
cactgctctgatagaaactttgcctacaaaatgtctgaagaactacatgacccctggata
aagaggatgtttattgggtttgcacgcacatctgactgtaatggacccagaaagccagtt
ggtcctcctcatcatttgattcaagagattgattctgaactaccagtttcacaacctgct
cttcagttgacatacaagattttgggatcttctccaccaacgagaagctttgacccggca
aagttgctcactgactctgggaagcttcaaacacttgatatattgttgaaacgattgcgg
gcagacaatcaccgtgttctcttgtttgcccaaatgacaaagatgctgaatattcttgag
gactacatgaactataggaaatatagataccttagactcgatggatcctccactataact
gatcgtcgagatatggtcagagatttccagcatcggaatgatatttttgtattcttgttg
agcacaagagctggtggacttggcattaacttgacagcggctgacactgtcatattttat
gaaagtgattggaatccaactttggatttacaggcaatggatagagctcatcggttgggt
caaacaaaagatgttactgtttaccgacttatttgtaaagagacagttgaagagaagatt
cttcaaagagcaagtcagaagaatactgtgcagcaacttgttatgacgggtggtcatgtt
cagggtgatctattggcccctgaggatgttgtatccttacttctggatgatgcccagctg
gagcagaaattgagagaaattccattacaggttaaggatagacaaaagaaaaaacaatca
acgaagggtattcgggtagatgcagaaggtgacgcatctttggaagacctaacaaatgct
ggatctcagggtacaggacctgagccctctccagatccagagaaagcaaaatccagtaac
aaaaagagaagggctgcttctgacaaacaagctccatcaaagcaaaggaatcctcaaaat
gtgacttcaccaatggactacgagttagatgacccccttcaaaattctgatccacaagca
cagaagcccaaaaggccgaagagaccaacgaagagtgtaaatgaaaatcttcaaccagca
tttaccggcacacccacggtagtttcagaacagacccattatctacctgtgaatgagtta
ggatctggtggtttcagagcagggcaagatatctcacagcataccaactcgttcacttga
DBGET
integrated database retrieval system
