Quercus lobata (valley oak): 115953221
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Entry
115953221 CDS
T07350
Name
(RefSeq) SNW/SKI-interacting protein A
KO
K06063
SNW domain-containing protein 1
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115953221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qlo03041
]
115953221
Spliceosome [BR:
qlo03041
]
Complex B
Other components
Prp19-related factors
115953221
Complex C
115953221
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Ortholog
Paralog
GFIT
Motif
Pfam:
SKIP_SNW
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
115953221
NCBI-ProteinID:
XP_030926615
UniProt:
A0A7N2R894
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Position
7:45687237..45689870
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AA seq
606 aa
AA seq
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MASLKDVLPPAKATTTLYYDHSNDPWFKQRFNFSETEKSSVIKQNPVPPYLKRAGFVPRK
VEDFGDGGAFPEIHIAQYPLDMGRDRSSKPGSKILPVTVDAHGNVAYDAIVRQNENARKI
VYSDHKDLIPKVLKNDSEENDDDDDDELQKEIEETTQETKAALEKIVNVRLSAAQPKNVP
KQNSDSKFIKYKPSQQSVAFNSGAKERIIRMMEMPVDPLEPPKFKHKRVPKASGSPPVPV
MHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQDVQINDNFAKLSE
ALYVAEQKAREAVAMRSKVQKEMMMKEKERKEQELRALAQRARSERTGVAPPAAVPIPTE
KNAMDNSDMRVDYEHAREREKDMPKESREEREERMRREKIREERRRERERERRLEAKDAA
MGKKSKITRDRDRDISEKVALGMASAGAGRGGEVMYDQRLFNQEKGMDSGFATDDQYNVY
DKGLFTAQPTLSTLYRPKKDVDAEIYGGADEQLEKIVKTDRFKPDKGFGGASEKAAPRDG
PLEFEQVAEEADPFGLDQFLTEVKKGKKALDKVGSGGTMKASAGSSMRDGYDGGSSRTRI
GFERGR
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttgaaggatgttcttccgccagccaaagcgaccacgactttgtattatgat
cattcgaatgatccatggttcaagcagaggtttaacttctctgaaacggagaagtctagt
gttattaagcagaatcctgttcctccttatttgaagcgtgcgggttttgttccccgaaaa
gtagaggatttcggggatgggggtgcatttccggagatccatattgcacagtacccgctt
gacatgggtagggacagatcatcgaagcctggatcgaagattcttcctgttactgttgat
gcccatggcaatgttgcctatgatgcgattgtgaggcagaatgagaatgcccgcaagatt
gtttactcagatcataaagatcttattccaaaggttttgaaaaatgatagtgaagagaac
gatgatgatgatgatgatgagctgcagaaagagattgaggagacaacccaagagacaaaa
gctgcacttgaaaagattgtgaatgtgaggttgagtgcggcacaaccaaaaaatgtgcca
aaacagaattctgactcaaagtttataaagtataagccgtcacagcaatcagttgcattc
aactcaggtgctaaagagagaataatcaggatgatggagatgcccgtggatccgcttgag
ccacctaagttcaagcataagcgtgttccaaaggcgtctgggtccccacctgtgccagtg
atgcattctcctcctaggccagtgaccgtgaaggaccaacaggattggaaaatcccacct
tgcatttcaaattggaagaacccaaaaggttatacaattcctcttgataaacgtcttgca
gctgatggcaggggccttcaagatgtccagatcaatgataattttgcaaagctttcagaa
gcattgtatgttgcagagcagaaggctcgagaagctgtagcaatgagatcaaaggttcaa
aaggagatgatgatgaaggagaaggaacggaaagaacaggagctgagggcactagctcaa
agggcacgctcggagagaactggtgtggcaccccctgctgctgttccaatccccactgag
aagaatgcaatggataactctgatatgagagtcgattatgagcatgcaagggaaagagag
aaggatatgcctaaggagtcgagggaggaaagggaagaacgcatgcggcgtgaaaaaatt
cgagaggagcgacgtcgagaaagggagagggagagaaggttggaagccaaggatgctgct
atggggaagaagagcaagatcacaagagatagagatcgtgatattagtgagaaggttgct
cttggcatggcttctgctggagcaggaagaggaggagaggttatgtatgaccaaagactt
tttaaccaggagaaaggaatggactcaggatttgcaactgatgaccagtacaatgtgtat
gacaagggcttgtttactgctcagccaacactttcaactttatacaggccaaagaaagat
gtcgatgcagagatttatggtggcgcagatgagcaattggagaagatcgtgaagactgac
cgcttcaagccggataagggctttggaggggcatctgaaaaggctgctccaagagatgga
ccacttgagtttgagcaggtggctgaagaggcagatccatttggactggatcagttcttg
acagaggtgaagaagggtaagaaagccctcgataaagttggtagtggtgggactatgaaa
gcaagtgctggatcttcaatgagagatggctatgacggaggttccagtagaactcgcatt
ggatttgaaagagggcgttaa
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