Quercus lobata (valley oak): 115953383
Help
Entry
115953383 CDS
T07350
Name
(RefSeq) E3 ubiquitin-protein ligase Praja-2
Organism
qlo
Quercus lobata (valley oak)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_11
zf-ANAPC11
zf-RING_UBOX
zf-HC5HC2H
zf-RING-like
Prok-RING_4
zf-HC5HC2H_2
DUF3408
U-box_ZFPL1
zf-C3HC4_3
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
115953383
NCBI-ProteinID:
XP_030926873
UniProt:
A0A7N2M5C8
LinkDB
All DBs
Position
7:31381747..31384897
Genome browser
AA seq
574 aa
AA seq
DB search
MDADTPRIPEQLPQSNAHGRINSGLIVDHSVQPAACGLCQRILSPENEASGDLQTIGICG
DCKFLILEDHWTPRQDSYQRRASRGRRTRYSSSESVEYHFSQELSHVINQARQNQSSVSG
YEDQPSDGDASVRLLQHSSSRSTPSGSGIWRRVLSDTESDGFDHPDSLYGESESNVSFGQ
YRVFHGESDAISFSAYGGDSDASVDGHSFLDREMSVQPDDGSVFESDTDIDPMHAGLDQW
DSEEDEDEEEEEEEEEEEEEEEEGEGEGEGEEEEGEWEEADAEDDAEALTEYEYQTFFTS
EAPTWRGRQGSQTFIHTIFANSEEEELPPYVRNSGDYLDARGFEELLVHLAETESSRRGA
PPAAVSFVNSLPRVVINEEHQKHEGLACAICKEVLPIGTEVNQLPCFHLYHPSCILPWLS
TRNSCPLCRYELPTDDKDYEEGKQNNSGGVGIHEIQQENVSDDDSSVVFDEAESDEEREL
NQGRTEQRELLDVDPATNSSGREGGRGRWFFLAAAPIVGLMGIVLVLWLGNPLIQRREPT
NQCSFVDPGHRQIHISTSSPTQRENRSRRWWSFF
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagacacaccaagaatcccagaacagttgcctcagtccaatgcccatggccgc
attaatagtggtttgattgttgaccattctgtccaaccagcagcatgtggtttatgccaa
agaatcctttctcctgaaaatgaggcaagtggtgacctccagaccattggtatatgtggg
gactgtaaattcttaattcttgaagatcattggacccccaggcaagactcatatcagcgt
agggcatctagaggaagaagaaccaggtacagcagttctgagtctgttgaatatcacttc
tcacaagaactttcacatgtaattaaccaggctaggcaaaaccaatcaagtgtctctggg
tatgaggatcaaccttcagatggtgatgcttcggttaggttattgcagcactcaagttcc
cgctctaccccaagtggatctggaatatggcggcgagtactctctgatactgaaagtgat
ggttttgatcatccggactccctttatggggagagtgaatcaaatgtcagttttggtcag
tacagggtttttcatggtgagagtgatgccatttcttttagtgcctatggaggggattct
gatgcttctgtagatggacatagtttcctggaccgtgaaatgtctgttcaaccagatgat
ggcagcgtttttgaaagtgatactgatattgatcctatgcatgctggccttgaccaatgg
gactctgaagaagacgaagatgaagaagaagaagaagaagaagaagaggaagaagaagaa
gaagaagaaggagagggagaaggagaaggagaagaagaagaaggtgagtgggaagaagct
gatgctgaagatgatgcagaagcattaactgaatatgaatatcaaacttttttcacttct
gaggctccgacttggagaggcaggcaaggttcacaaacatttattcataccatctttgct
aactcagaggaagaagagttaccgccttatgtcaggaattctggggattatcttgatgca
agaggctttgaagaactgcttgtacatcttgctgagactgaaagctctagacgaggagca
cctcctgcagccgtgtcttttgtaaatagtctgcctcgtgtagtcattaatgaggagcat
cagaagcatgaaggcttagcatgtgcaatatgcaaagaagttctacccattggcaccgaa
gtaaatcagcttccctgctttcacctctatcacccttcatgtatcttgccgtggttgagc
acacgaaattcatgtcccctttgtcggtatgagcttcctactgatgacaaagattatgaa
gaggggaagcagaacaatagtggtggagtgggaatccatgaaatccagcaggaaaatgtc
agtgacgacgattcttctgttgtctttgatgaagctgaatcagatgaagagcgtgaactt
aatcaaggcagaacagagcagagagaactgctagatgtggatcctgctactaatagctct
ggtcgggagggtggtagggggagatggttttttcttgctgctgctcctattgtcggtctc
atgggcattgtgctcgtgttgtggttaggcaatcctctgattcaaagaagagagccaaca
aaccaatgcagctttgttgatcctggccatcgtcaaattcacatttctacctcctcaccc
acccaaagggagaataggagtaggagatggtggtcatttttctag
DBGET
integrated database retrieval system
