Quercus lobata (valley oak): 115953553
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Entry
115953553 CDS
T07350
Name
(RefSeq) E3 ubiquitin-protein ligase HAKAI homolog
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115953553
04131 Membrane trafficking [BR:
qlo04131
]
115953553
04121 Ubiquitin system [BR:
qlo04121
]
115953553
Enzymes [BR:
qlo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115953553
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
115953553
Membrane trafficking [BR:
qlo04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
115953553
Ubiquitin system [BR:
qlo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115953553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
115953553
NCBI-ProteinID:
XP_030927141
UniProt:
A0A7N2M5F1
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All DBs
Position
7:complement(36218309..36223752)
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AA seq
498 aa
AA seq
DB search
MLQIRLSKAPAAEGVGGAKPLPVDSVTVACPDHLVLAELPVAKGIGAATSASLVKTVGRR
SRRPLGERVHFCVRCDFPVAIYGRLSPCEHAFCLDCARSDSICYLCDERIQKIQTIKMME
GIFICAAPHCLKSFLKRSEFESHINESHADLLQPNAEKEDGNESESQSVKQSGASESTAR
APPRPVFSPGSNSQIHDREDKTRRQQPREPPPSRPNVQPKQPQSFGQVQNHPSELQPDNN
RPQGFDRLGPQNRFHQQGFDTQGGPQQESGQFPDKQQGILSENQFPEYPPMHSIQTPNYA
VPVNANPMLNPPPPFGYPPFQTEGGQPFYGAPYEMTRQDSASEVGAEQGSLLGFPPVQVG
GVNFSGNYAQPWNGGFVGAPFEHPHGGHGMLDGFANASDSHGKAAFHQGDYGRNSGGLLL
NPPPLANKGMEQAQSGNAMDPRDGKGILAPQPMTLPPPPPPPPHSSQLKRKFYSESSHDG
QGYGWQHENRDSFGSSQD
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagattcggcttagcaaggctccggctgcagaaggtgttggaggggcgaagccc
ttgccggtggatagtgtgacggtggcgtgccctgaccaccttgtccttgctgaactccct
gtggcaaagggcattggtgcagccacttctgcttcccttgtcaagactgttggtcgcagg
tcccgccgcccgcttggtgagcgagtccacttctgcgttcgttgtgatttcccggtcgct
atctatggacgcctgagcccttgtgagcatgccttctgtcttgattgtgctaggagtgat
tcaatttgctacctttgtgatgaacgtatacagaagattcagacaattaaaatgatggaa
gggatcttcatctgtgcagcacctcattgtctaaagtcttttctgaagaggtctgaattt
gaatctcacatcaatgagagccatgctgaccttcttcaacccaatgctgagaaagaagat
ggaaatgaatcagagtctcagagtgttaaacaatctggagcttctgaatccacagcccgg
gctcccccaaggccggtcttttctcctggttcaaattcccagattcatgatcgtgaagac
aaaacccgtcgacagcaacctagagaaccaccaccttcaaggccaaatgtacagccaaag
caaccacaaagttttggacaagtgcaaaatcatccatcagagctccaaccagataacaac
cgaccgcaaggctttgacaggctgggtcctcaaaaccgattccatcaacagggttttgac
acccaaggtggcccacaacaagagtctggtcagtttccagacaagcagcagggaatccta
tctgagaaccagtttcctgaatacccacctatgcattccattcagacacctaattatgct
gtgccagtcaatgcaaatccaatgctaaatccccctccaccttttggttaccctcctttc
cagactgagggaggtcaaccattttatggtgctccctatgagatgacaaggcaagattca
gcttcagaagtaggagcggaacaggggtcattgttgggtttcccaccagttcaagtgggt
ggtgtgaatttctcaggaaactatgctcaaccctggaatggaggctttgttggtgcacct
tttgagcatccacacggtggtcatggaatgctagatggctttgctaatgcatcagattct
catgggaaagctgcattccatcaaggtgactatggacgcaattctggaggtttgctttta
aatcctccacctttggctaacaagggcatggaacaagcgcagagtggcaatgcgatggat
ccaagggatggcaagggcattttggcaccacagcctatgacactcccaccgccaccacca
cccccacctcactcgtcccagcttaaaagaaagttctattctgaatcaagccatgacgga
cagggctatggctggcagcatgagaaccgtgacagttttgggagtagccaggactag
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