Quercus lobata (valley oak): 115953565
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Entry
115953565 CDS
T07350
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03030
DNA replication
qlo03410
Base excision repair
qlo03420
Nucleotide excision repair
qlo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
115953565
03410 Base excision repair
115953565
03420 Nucleotide excision repair
115953565
03430 Mismatch repair
115953565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
qlo03032
]
115953565
03036 Chromosome and associated proteins [BR:
qlo03036
]
115953565
03400 DNA repair and recombination proteins [BR:
qlo03400
]
115953565
DNA replication proteins [BR:
qlo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
115953565
DNA Replication Termination Factors
ELG1-RFC complex
115953565
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
115953565
DNA repair and recombination proteins [BR:
qlo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
115953565
Check point factors
HRAD17(Rad24)-RFC complex
115953565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA
Sigma54_activ_2
Rad17
RuvB_N
Mg_chelatase
AAA_5
AAA_22
DUF815
ABC_tran
AAA_23
AAA_11
nSTAND3
AAA_24
AAA_29
AAA_16
AAA_2
TsaE
SprT-like
Motif
Other DBs
NCBI-GeneID:
115953565
NCBI-ProteinID:
XP_030927157
UniProt:
A0A7N2M3K4
LinkDB
All DBs
Position
7:complement(18990170..18999638)
Genome browser
AA seq
354 aa
AA seq
DB search
MLWVDKYRPKTLDNITAHQHIAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMALLRQMFG
PTAEKVKVENKTWKVDAGSRTLDIELTTLSSTNHVELNPSDAGFQDRYIVQEIIKEMAKN
RPIDTKGKKGFKVLVLNEVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSKVTEAIRSR
CLNVRINAPTEEEIVKVLELIGKKEGLQLPSGFAALIAEKSNRSLRRAILSFETCRVQQY
PFTSKQVISSMDWEEYVAELASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYE
LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKSFLIATFG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgggtagacaagtacagacccaaaaccctagacaacatcaccgcccatcaacac
atagcccaaaacctcaagaaactcgtgacggagcaggattgcccacatttgctcttctat
ggcccaccgggttccggcaagaaaaccctaatcatggcccttcttcgacagatgtttggc
cccactgctgaaaaggtgaaagtcgaaaataagacatggaaagtcgatgctggaagtcga
actcttgatatagagcttaccacattgtcaagcaccaaccatgtggaattgaatcccagt
gatgcagggtttcaggacagatatattgttcaagaaataattaaagaaatggctaaaaat
agacccattgacaccaaaggaaaaaaaggatttaaagtattagtgctcaatgaggtggac
aaactttcaagagaagcccagcattctctccgaagaactatggagaaatatagtgcttat
tgccgtctaatactgtgctgcaacagttcttcaaaggttactgaagcaatccggtctcgc
tgcttgaatgtgcgaataaatgcaccaacagaagaagagattgttaaggtattggaactc
attgggaagaaggaaggactacaacttccatctggatttgctgctcttatagcagaaaag
tcaaatcggagtttaaggagagctatactgtcatttgagacttgtcgtgtccaacagtat
ccctttacaagcaaacaagtaatatcctcaatggattgggaggaatatgttgctgaacta
gcatctgacataatgaaggagcagagtcctaaaaggctgtttcaggttcgagggaagttg
tatgagctacttgtcaattgtattcctccagagattatcttgaagaggctgctttatgaa
ttattaaagaaattggatgctgaactaaaacatgaggtttgccattgggctgcatattat
gagcataggatgcgtctaggacagaaagctatatttcacattgaagcatttgtggccaag
ttcatgagcatttacaagtcttttctcattgcgacttttggctga
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