KEGG   Quercus lobata (valley oak): 115953731
Entry
115953731         CDS       T07350                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A-like
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo03020  RNA polymerase
qlo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    115953731
  09124 Replication and repair
   03420 Nucleotide excision repair
    115953731
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:qlo03021]
    115953731
   03400 DNA repair and recombination proteins [BR:qlo03400]
    115953731
Transcription machinery [BR:qlo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     115953731
  RNA polymerase III system
   RNA polymerase III
     115953731
  RNA polymerase I system
   RNA polymerase I
     115953731
DNA repair and recombination proteins [BR:qlo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      115953731
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N NA-iREase1
Other DBs
NCBI-GeneID: 115953731
NCBI-ProteinID: XP_030927357
UniProt: A0A7N2M5Q8
LinkDB
Position
7:complement(38122870..38127169)
AA seq 206 aa
MVMSDDETNRLFRIRKTVMQMLKDRGYLVADFEVDMTKEQFRRKYGESMKREDLVINKTK
RTDSSDQIYVFFPEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCISEISSK
FHLEVFQEAELMVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYG
LKRGQVVKIIRPSETAGRYVTYRYVV
NT seq 621 nt   +upstreamnt  +downstreamnt
atggtgatgtcggacgatgaaacaaacaggctatttaggatccgaaaaacagtcatgcaa
atgcttaaggatcggggttatttggttgcagactttgaggttgacatgaccaaagaacag
ttcagaaggaaatacggtgagagcatgaagagggaagaccttgtcatcaacaaaaccaag
cgaactgattcctctgatcagatctatgttttcttccctgaggaaccaaaggttggtgtt
aagacaatgaagacttacaccaatcgcatgaagtcggagaatgttttcagagcaatcttg
gttgttcaacaaaatttaaccccctttgcgaggacctgtataagtgagatatcttcaaag
ttccacttggaggttttccaggaggcagagctgatggtaaacattaaagagcatgttctt
gttcccgagcatcaggtgcttacaactgaggagaagaaaactttgctggagaggtacacc
gtaaaagaaacacagctgcctcgtattcaagtgactgatccaattgccagatattatggg
ctgaagcgtggacaagttgtgaagataatccggccaagtgaaactgctggccgatatgtc
acctaccgatatgttgtataa

DBGET integrated database retrieval system