Quercus lobata (valley oak): 115953809
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Entry
115953809 CDS
T07350
Name
(RefSeq) transcription factor E2FA
KO
K06620
transcription factor E2F3
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
qlo03000
]
115953809
Transcription factors [BR:
qlo03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
115953809
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GFIT
Motif
Pfam:
E2F_CC-MB
WHD_E2F_TDP
Plectin_PPL
TrmB
SKA1
Nuf2_DHR10-like
HTH_47
ZapB
DUF2250
CC_Bre1
Motif
Other DBs
NCBI-GeneID:
115953809
NCBI-ProteinID:
XP_030927467
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Position
7:37458094..37463732
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AA seq
471 aa
AA seq
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MSGGARAPNRPAPPPPTVASQILPPPPPMKRNLAALASTKPPFVPPDDYHRFSSVAADRE
AEALVVRSPLLKRKNGTDDNEVQSIDWTNSPGYTSVVNSPLKTPVSAKGGRIYNRSKGTK
GNRSGPQTPVSNAGSPSPLTPGSCRYDSSLGLLTKKFINLLKQAEDGNLDLNKAAETLEV
QKRRIYDITNVLEGIGLIEKKLKNRIHWKGLDALRPGEVEDDASALQAEVENLTMQERTL
DDQIREMQERLRDLSEDENKKKWLFVTKEDIKGLPCLQNETLLAIKAPHGTTLEVPDPDE
AVDYPQRRYRVILRSAMGPIDVYLVSQFEEKFEEMNSVEPPVSFPMVSSSGSNDNPAIDE
VVNANSTMKEVMPQAQHSHQMCSDLNASQEFAGGMMKIVPSDVDNDADYWLLSDAEVSIT
DMWKTDAGIEWSGMDMLHPDFGIPDVSTPRSQTPLSGMAEVPSTAFDSTRR
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcggcgctcgagctccgaaccgccctgcgccgcctccgccgaccgtcgcgtca
cagatcctccctccgccgccgccgatgaagcggaacctcgccgcgctcgcctccaccaag
ccgccgttcgtccctcccgacgattaccaccgcttctcctccgtcgccgccgatcgtgaa
gccgaagctcttgtggttagatctcccctattaaagcggaagaatggaacagatgacaat
gaagttcagtctattgactggactaacagtcctggatacactagtgtagtaaacagcccc
ctcaagacacctgtgtctgcaaaagggggaaggatatacaacaggtcaaagggtacaaag
ggcaacagatctgggcctcagacacctgtgtcaaatgctggttccccatctcctcttact
cccggcagttgtcgttatgacagttccctaggattgttgacaaaaaagttcatcaatttg
ctcaagcaagcggaggatggtaatcttgacctaaacaaagcggcagaaactttggaggtg
caaaagaggcgaatatatgacataacaaatgtcttggaaggcattggactcattgaaaag
aaactcaagaacagaatacattggaagggattagatgctttaaggccaggggaggttgaa
gatgacgcctctgcactacaggcagaagttgaaaaccttaccatgcaagagcgaacatta
gatgatcagataagggaaatgcaggaaagattgagggatttgagtgaagatgaaaacaag
aaaaagtggctttttgtaaccaaagaagatattaagggcttaccctgcctccagaacgaa
accctgttagcaattaaagctccacatggaaccacactggaagtcccagatccagatgag
gctgttgactatccacagagaagatatagggttattcttagaagtgcaatgggccctatc
gatgtctaccttgtcagtcaatttgaggagaagtttgaggagatgaatagtgttgagcca
cctgtgagcttcccaatggtttcaagctcagggtctaatgataacccagccattgacgaa
gtggtcaatgccaatagcaccatgaaggaagttatgcctcaggcacaacacagtcatcaa
atgtgctctgatcttaatgcttcacaggagtttgctgggggcatgatgaaaattgttccc
tcagatgttgataatgatgcagattactggcttctgtcagatgctgaagttagcataaca
gatatgtggaaaacagatgccggtattgaatggagtgggatggatatgcttcaccctgac
tttgggatacctgatgttagtactccaaggtcacaaactccattatctggaatggctgaa
gtgccatctacagcttttgactctacccgaagatga
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