KEGG   Quercus lobata (valley oak): 115953826
Entry
115953826         CDS       T07350                                 
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X1
  KO
K08775  breast cancer 2 susceptibility protein
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo03440  Homologous recombination
qlo03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    115953826
   03460 Fanconi anemia pathway
    115953826
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:qlo04121]
    115953826
   03036 Chromosome and associated proteins [BR:qlo03036]
    115953826
   03400 DNA repair and recombination proteins [BR:qlo03400]
    115953826
Ubiquitin system [BR:qlo04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   BRCC complex
    115953826
Chromosome and associated proteins [BR:qlo03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Other centrosome duplication proteins
     115953826
DNA repair and recombination proteins [BR:qlo03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA complex
     115953826
   FA (Fanconi anemia) pathway
    Downstream FA components
     115953826
SSDB
Motif
Pfam: BRCA-2_OB1 BRCA2 BRCA-2_helical
Other DBs
NCBI-GeneID: 115953826
NCBI-ProteinID: XP_030927486
UniProt: A0A7N2M510
LinkDB
Position
7:34071032..34080012
AA seq 1119 aa
MSTWQIFSDAGNDFRWEPSDRDLQIKPDDDSPNGRSTRLPSMSDLALQGCAKLLENRSEG
FGSSPMFRTGSGKSVAVKQSSLAKALSVLGDDAETNSGRVLARDNGCGSANSLFQTGSGK
MVNISSDGLVRAKTLLGLEEDNDNCVFQGLQHSVKPCNTNGSFGWKSSSDMEMREGVNNC
EIKNFTSVTGSSLVSKIGLEATRLLTNQENPNLMQPEMYNSALKPPPIKFHTAGGRSISV
SSDALKRARSLLGDPELGTFLNEGDGNDSVFSFSKETRFNGASSNDGNDPCTPFSYKEMA
ESKNMSKVFVSPLRSSSNQVRSSVKSKHIVSGNNLIEEFDAVQQENASGLNINASSLQKP
LSNSHVDPNTVAKSSLSNGISSRINAPRKSPARPLVDISNTIVTTCKNTGQMNSVKRILG
RSSVSPFKRPRSKFSTPLNKDVPFISNGLSTLASDHSCCKRRISERYPFQMSRMYVKEYF
KVPLSDQNMLDLLSDQVRWMKSIDAEKYMFHDVSGLNGIGPEAFLHMLAQSGASLQYASK
EWVINHYKWIVWKLACYERCYPEIAAGKFLTVSNVLEELKYRYEREVNHGHCSAIKRILE
GGASPSSMMVLCVSAICSNSDLKNETCSMAVIGAENSNVTKVELTDGWYAMDAVLDVPLS
KQLAAGKLFVGQKLRIWGAGLCGWLAPVSPLEVSRTVSLLLHMNGTYRAHWADRLGFCKG
VGSPLAFRCIKSNGGLVPQTIVGVTRIYPVLYKERLSNGGSIVRSERMECRMVQVYDQRR
STVVEGIVSEFQRGIKGSHIYNDSDSDEGANILKILETAAEPEVLMAGMSPQQLTSFTTY
KAKLEATRQSDMEKSIEKALEDSGLGEREVTPFMRVRVVGLNNKISDRKDSPKEGLITIW
NPTEKQQYELVEGQAYAVSGLAPINSDAHTLYLQARGSTAKWKPLSSQETEHYKPFHSPR
KAVLLSNLGEVPLSSEFDIAVVIVYVGEVFKAPHQKKQWVFVTDSSISESQSEELSNSLL
AIRFCSPFIDDDSFAPVNSNLAGSTVGFCNLIKRAKDQMNHLWVAESTENSIYSLNFDSP
HCSHLKNAAASAQRWAKLSSLTIDKLREKVLLIIGDCKG
NT seq 3360 nt   +upstreamnt  +downstreamnt
atgtcgacctggcagatattctccgacgccggcaacgatttccggtgggaaccctccgat
cgagacctccaaatcaaacccgacgatgattcaccaaatggcagaagcactcgtctccct
tcgatgtccgatctcgctctccaaggatgtgcgaaacttctggagaatcgcagcgaagga
tttgggagttctccgatgttccgaaccgggtcggggaaatcggttgcggtgaaacagtct
tcgttagcgaaggccttatcggttcttggcgacgatgcggagaccaattcaggtcgggtg
ctagctagagataatggatgtggttctgcaaattctctcttccagacaggctcagggaaa
atggtcaatatatcttcagacggccttgttagagccaagacattgttgggattggaagaa
gataatgataattgtgtttttcaaggccttcaacattcagtgaagccgtgtaacaccaat
ggatcatttggatggaaaagttcatctgatatggaaatgagagagggtgtgaacaattgt
gagattaagaatttcacatcagttacagggtcttcgttagtttctaagattggtttagaa
gcaactaggttgttgacaaatcaggaaaatccaaatcttatgcaacccgaaatgtataat
tcagctctcaaaccacctccaatcaagttccatactgcaggtggaagatctatttctgtc
tctagtgatgcactaaaacgtgcaaggagtcttcttggtgacccagaattgggaactttc
ttgaatgaaggggatggaaatgattcagttttttcattttcaaaggagacaagattcaat
ggtgcttcttcaaatgacggaaatgatccttgcactcccttttcttataaggaaatggca
gagagtaaaaatatgtcgaaagtttttgtgtccccgttgcgatcatcttcaaatcaagtg
cggtcgtccgtcaagtcaaaacatattgtttctgggaataacttgatcgaagaatttgat
gctgttcaacaggaaaatgctagtgggttaaatattaatgcgtcttctctacagaagccc
ctaagcaacagccatgttgatcctaatacagtggcaaaaagttctttatcaaatggtatc
agttcaaggattaatgcacctcgaaagtcaccagccaggcccttggttgatatttcaaat
actattgtcacaacttgcaaaaatactggacaaatgaatagcgtaaagagaatactagga
aggagttctgtttctccattcaaaaggcctcgttccaaattctccacccctttgaataag
gatgttccatttatttccaatggattatctactttagcatctgatcattcatgttgcaaa
agaaggatttctgaacgatacccgtttcagatgtcgagaatgtatgtcaaggaatatttt
aaagtgcctctgtcagatcagaatatgttggatcttttgtcagaccaggttcgatggatg
aaatcaattgatgcagaaaagtacatgtttcatgatgtatctggcttaaatggcattgga
ccagaagcttttctccacatgctggctcagtctggagcatccttgcaatatgcttcaaaa
gaatgggtcatcaatcactacaagtggattgtttggaaactggcatgttatgagagatgc
tatccagaaatagctgctggaaaattcttgacagtgtccaacgtgctcgaggaattgaag
tatagatatgaaagagaagtcaatcatggtcactgttctgcaatcaagagaattctggaa
gggggtgcatcaccttcttcaatgatggttctatgcgtttcagctatttgctcaaattct
gacctaaagaatgagacttgttccatggcagtaattggggctgaaaatagtaatgtgaca
aaggttgaactaactgatgggtggtatgcaatggatgctgtactggatgtaccactgtca
aagcagcttgctgccggaaaactgtttgtggggcagaaacttcggatctggggagcagga
ttatgtggctggcttgcgcctgtttcaccccttgaggtgtcgaggacagttagtctgcta
ttgcacatgaatggcacatatagagctcattgggctgatcggctgggattctgtaaaggt
gttggttctcctttagcatttaggtgcattaagagtaacggtggtctagtccctcagact
atagttggagtcacacgaatataccctgtcctctacaaggagaggttaagtaatggcggg
tctattgtcagatcggagaggatggagtgtagaatggtgcaagtatatgatcagaggcga
tctactgttgtagaaggcattgtttccgagtttcaaagaggcataaaaggttcacatatt
tataatgactctgacagcgatgaaggagcaaatattttaaagatacttgagacagctgca
gaacctgaagttttaatggcagggatgagtccacagcaattaacttctttcaccacttat
aaagcaaaactagaggcaaccaggcagtcagacatggagaaatcaattgagaaagctttg
gaagattctggtttaggagagagagaagtcaccccatttatgagggtgagagtagttgga
ttaaataataaaatttctgacagaaaggacagccctaaagaagggttgataacaatctgg
aacccaacagagaagcagcaatatgaactggttgagggacaggcttatgctgtttcaggg
cttgcaccaattaattctgatgcacataccctatacttgcaagcaagaggatccactgcc
aaatggaagcctttatcttcccaagaaactgaacactataagccatttcacagtcctcgg
aaagcagtcttattgtcaaatttgggagaagttcctctttccagtgaatttgatattgct
gtggtcattgtgtatgtgggagaggtttttaaagctccccatcaaaagaaacagtgggtg
tttgtgacagatagctccatttctgagtcgcagtcagaagaattatccaattctttactt
gccatcagattctgctcaccattcattgatgatgattcattcgccccagtcaactctaat
cttgcaggatccacagttggattctgtaatcttatcaagagagcaaaggaccaaatgaat
catctctgggtagcagaatctacggaaaattcaatatactctctgaattttgattctccc
cattgttctcacctcaaaaatgcagctgcctctgctcaaagatgggcaaaactctctagc
ttgactattgataagcttagggagaaggttttattaattattggtgattgcaaaggctag

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