Quercus lobata (valley oak): 115953826
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Entry
115953826 CDS
T07350
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03440
Homologous recombination
qlo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115953826
03460 Fanconi anemia pathway
115953826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qlo04121
]
115953826
03036 Chromosome and associated proteins [BR:
qlo03036
]
115953826
03400 DNA repair and recombination proteins [BR:
qlo03400
]
115953826
Ubiquitin system [BR:
qlo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
115953826
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
115953826
DNA repair and recombination proteins [BR:
qlo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
115953826
FA (Fanconi anemia) pathway
Downstream FA components
115953826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
115953826
NCBI-ProteinID:
XP_030927486
UniProt:
A0A7N2M510
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Position
7:34071032..34080012
Genome browser
AA seq
1119 aa
AA seq
DB search
MSTWQIFSDAGNDFRWEPSDRDLQIKPDDDSPNGRSTRLPSMSDLALQGCAKLLENRSEG
FGSSPMFRTGSGKSVAVKQSSLAKALSVLGDDAETNSGRVLARDNGCGSANSLFQTGSGK
MVNISSDGLVRAKTLLGLEEDNDNCVFQGLQHSVKPCNTNGSFGWKSSSDMEMREGVNNC
EIKNFTSVTGSSLVSKIGLEATRLLTNQENPNLMQPEMYNSALKPPPIKFHTAGGRSISV
SSDALKRARSLLGDPELGTFLNEGDGNDSVFSFSKETRFNGASSNDGNDPCTPFSYKEMA
ESKNMSKVFVSPLRSSSNQVRSSVKSKHIVSGNNLIEEFDAVQQENASGLNINASSLQKP
LSNSHVDPNTVAKSSLSNGISSRINAPRKSPARPLVDISNTIVTTCKNTGQMNSVKRILG
RSSVSPFKRPRSKFSTPLNKDVPFISNGLSTLASDHSCCKRRISERYPFQMSRMYVKEYF
KVPLSDQNMLDLLSDQVRWMKSIDAEKYMFHDVSGLNGIGPEAFLHMLAQSGASLQYASK
EWVINHYKWIVWKLACYERCYPEIAAGKFLTVSNVLEELKYRYEREVNHGHCSAIKRILE
GGASPSSMMVLCVSAICSNSDLKNETCSMAVIGAENSNVTKVELTDGWYAMDAVLDVPLS
KQLAAGKLFVGQKLRIWGAGLCGWLAPVSPLEVSRTVSLLLHMNGTYRAHWADRLGFCKG
VGSPLAFRCIKSNGGLVPQTIVGVTRIYPVLYKERLSNGGSIVRSERMECRMVQVYDQRR
STVVEGIVSEFQRGIKGSHIYNDSDSDEGANILKILETAAEPEVLMAGMSPQQLTSFTTY
KAKLEATRQSDMEKSIEKALEDSGLGEREVTPFMRVRVVGLNNKISDRKDSPKEGLITIW
NPTEKQQYELVEGQAYAVSGLAPINSDAHTLYLQARGSTAKWKPLSSQETEHYKPFHSPR
KAVLLSNLGEVPLSSEFDIAVVIVYVGEVFKAPHQKKQWVFVTDSSISESQSEELSNSLL
AIRFCSPFIDDDSFAPVNSNLAGSTVGFCNLIKRAKDQMNHLWVAESTENSIYSLNFDSP
HCSHLKNAAASAQRWAKLSSLTIDKLREKVLLIIGDCKG
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacctggcagatattctccgacgccggcaacgatttccggtgggaaccctccgat
cgagacctccaaatcaaacccgacgatgattcaccaaatggcagaagcactcgtctccct
tcgatgtccgatctcgctctccaaggatgtgcgaaacttctggagaatcgcagcgaagga
tttgggagttctccgatgttccgaaccgggtcggggaaatcggttgcggtgaaacagtct
tcgttagcgaaggccttatcggttcttggcgacgatgcggagaccaattcaggtcgggtg
ctagctagagataatggatgtggttctgcaaattctctcttccagacaggctcagggaaa
atggtcaatatatcttcagacggccttgttagagccaagacattgttgggattggaagaa
gataatgataattgtgtttttcaaggccttcaacattcagtgaagccgtgtaacaccaat
ggatcatttggatggaaaagttcatctgatatggaaatgagagagggtgtgaacaattgt
gagattaagaatttcacatcagttacagggtcttcgttagtttctaagattggtttagaa
gcaactaggttgttgacaaatcaggaaaatccaaatcttatgcaacccgaaatgtataat
tcagctctcaaaccacctccaatcaagttccatactgcaggtggaagatctatttctgtc
tctagtgatgcactaaaacgtgcaaggagtcttcttggtgacccagaattgggaactttc
ttgaatgaaggggatggaaatgattcagttttttcattttcaaaggagacaagattcaat
ggtgcttcttcaaatgacggaaatgatccttgcactcccttttcttataaggaaatggca
gagagtaaaaatatgtcgaaagtttttgtgtccccgttgcgatcatcttcaaatcaagtg
cggtcgtccgtcaagtcaaaacatattgtttctgggaataacttgatcgaagaatttgat
gctgttcaacaggaaaatgctagtgggttaaatattaatgcgtcttctctacagaagccc
ctaagcaacagccatgttgatcctaatacagtggcaaaaagttctttatcaaatggtatc
agttcaaggattaatgcacctcgaaagtcaccagccaggcccttggttgatatttcaaat
actattgtcacaacttgcaaaaatactggacaaatgaatagcgtaaagagaatactagga
aggagttctgtttctccattcaaaaggcctcgttccaaattctccacccctttgaataag
gatgttccatttatttccaatggattatctactttagcatctgatcattcatgttgcaaa
agaaggatttctgaacgatacccgtttcagatgtcgagaatgtatgtcaaggaatatttt
aaagtgcctctgtcagatcagaatatgttggatcttttgtcagaccaggttcgatggatg
aaatcaattgatgcagaaaagtacatgtttcatgatgtatctggcttaaatggcattgga
ccagaagcttttctccacatgctggctcagtctggagcatccttgcaatatgcttcaaaa
gaatgggtcatcaatcactacaagtggattgtttggaaactggcatgttatgagagatgc
tatccagaaatagctgctggaaaattcttgacagtgtccaacgtgctcgaggaattgaag
tatagatatgaaagagaagtcaatcatggtcactgttctgcaatcaagagaattctggaa
gggggtgcatcaccttcttcaatgatggttctatgcgtttcagctatttgctcaaattct
gacctaaagaatgagacttgttccatggcagtaattggggctgaaaatagtaatgtgaca
aaggttgaactaactgatgggtggtatgcaatggatgctgtactggatgtaccactgtca
aagcagcttgctgccggaaaactgtttgtggggcagaaacttcggatctggggagcagga
ttatgtggctggcttgcgcctgtttcaccccttgaggtgtcgaggacagttagtctgcta
ttgcacatgaatggcacatatagagctcattgggctgatcggctgggattctgtaaaggt
gttggttctcctttagcatttaggtgcattaagagtaacggtggtctagtccctcagact
atagttggagtcacacgaatataccctgtcctctacaaggagaggttaagtaatggcggg
tctattgtcagatcggagaggatggagtgtagaatggtgcaagtatatgatcagaggcga
tctactgttgtagaaggcattgtttccgagtttcaaagaggcataaaaggttcacatatt
tataatgactctgacagcgatgaaggagcaaatattttaaagatacttgagacagctgca
gaacctgaagttttaatggcagggatgagtccacagcaattaacttctttcaccacttat
aaagcaaaactagaggcaaccaggcagtcagacatggagaaatcaattgagaaagctttg
gaagattctggtttaggagagagagaagtcaccccatttatgagggtgagagtagttgga
ttaaataataaaatttctgacagaaaggacagccctaaagaagggttgataacaatctgg
aacccaacagagaagcagcaatatgaactggttgagggacaggcttatgctgtttcaggg
cttgcaccaattaattctgatgcacataccctatacttgcaagcaagaggatccactgcc
aaatggaagcctttatcttcccaagaaactgaacactataagccatttcacagtcctcgg
aaagcagtcttattgtcaaatttgggagaagttcctctttccagtgaatttgatattgct
gtggtcattgtgtatgtgggagaggtttttaaagctccccatcaaaagaaacagtgggtg
tttgtgacagatagctccatttctgagtcgcagtcagaagaattatccaattctttactt
gccatcagattctgctcaccattcattgatgatgattcattcgccccagtcaactctaat
cttgcaggatccacagttggattctgtaatcttatcaagagagcaaaggaccaaatgaat
catctctgggtagcagaatctacggaaaattcaatatactctctgaattttgattctccc
cattgttctcacctcaaaaatgcagctgcctctgctcaaagatgggcaaaactctctagc
ttgactattgataagcttagggagaaggttttattaattattggtgattgcaaaggctag
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