Quercus lobata (valley oak): 115953878
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Entry
115953878 CDS
T07350
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo00040
Pentose and glucuronate interconversions
qlo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115953878
Enzymes [BR:
qlo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
115953878
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
115953878
NCBI-ProteinID:
XP_030927558
UniProt:
A0A7N2M5S7
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Position
7:46250636..46255287
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AA seq
379 aa
AA seq
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MGNIHGHRKHRNSSHQNKPPSNSQPFKYGPSDQAPQVPSSTKPKPKTNMVSLPYGHVDST
LRALAGQAEGFGHRAIGGLHGSLYHVTTLADDGPGSLREGCRNKEPLWIVFEVLGTIHLS
SYLNVSSYKTIDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGPDVDAIQIKPNSKHI
WIDRCTLRDYDDGLIDITRESTDITVSRCHFLQHDKTMLIGADPSHIGDRCIRVTIHHCF
FDGTKQRHPRVRYGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKRVAFKYLTE
KATDREEATTGCINSEGDLFISATQAGLMTKDTAHKMFHPSEHYPIWTVEPPTDDLKQVL
QHCTGWQSVPRPADQKAVA
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggggaacatccatggccatcgcaaacaccgtaacagctctcatcaaaataaaccgcct
tcaaattcacagccctttaaatatggtccgtccgatcaagctccacaagtccccagctcc
accaagcctaagcccaaaaccaacatggtctccttgccttacggtcatgtggactcgacc
ctacgagccctcgccggccaagccgaggggttcggccaccgcgccatcggtgggctccac
ggttctctttaccatgtcaccaccttagcagatgatgggccaggatcacttcgtgaagga
tgtcgtaataaagaaccactatggattgtgtttgaagttttaggcaccattcatctctct
tcttacttgaatgtgtcgtcttataagaccattgatggccgaggccaaaggattaaactc
actgggaaaggtttgaggctgaaggagtgtgaacatgtaattatatgcaatctggagttt
gaaggtggtagaggtcctgatgttgatgccatccaaatcaaacctaattcaaaacatata
tggatagaccgctgcacccttcgtgactatgatgatggactgatagatatcactagggaa
agcacagatattactgtttctaggtgtcactttttacaacatgacaagacaatgctcatt
ggagcagacccttctcatattggtgacagatgcattcgagtgaccattcaccattgtttt
tttgatgggaccaaacagcggcatcctcgagttagatatgggaaagtgcatctttacaac
aattataccagaaactggggcatttatgctgtttgtgccagtgtggaatcacagatatac
tcccaatgcaatatatatgaagcaggacaaaagagggttgcatttaaatatctcacagag
aaggcaactgacagggaggaggcaacaactggctgcataaactctgaaggggatttattc
attagtgcaactcaagcggggctaatgaccaaggatactgcacacaaaatgtttcatcct
agcgaacactaccctatatggacagtggaaccgcccacggatgatcttaaacaagttctc
cagcattgcacaggatggcagtctgttccacgacctgcagatcagaaggcggtagcgtag
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