Quercus lobata (valley oak): 115953930
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Entry
115953930 CDS
T07350
Name
(RefSeq) RNA-binding protein Y14B-like
KO
K12876
RNA-binding protein 8A
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03013
Nucleocytoplasmic transport
qlo03015
mRNA surveillance pathway
qlo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115953930
09122 Translation
03013 Nucleocytoplasmic transport
115953930
03015 mRNA surveillance pathway
115953930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115953930
03041 Spliceosome [BR:
qlo03041
]
115953930
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
115953930
Spliceosome [BR:
qlo03041
]
Complex C
Other components
EJC/TREX
115953930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_ESF1
Motif
Other DBs
NCBI-GeneID:
115953930
NCBI-ProteinID:
XP_030927620
UniProt:
A0A7N2M2W9
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Position
7:2696207..2701472
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AA seq
142 aa
AA seq
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MECYDADDDVLMEMEAGEVQTAHFFAPNPSYFPLQSVEGWTLLVTGVHQEAEERDVLDLF
GEFGEVKSLHLNLNHRTGYLMGYALIEYDNFEAAQDAISTMNGTELFDSTISVDWAFCRD
PSNASYLRSPHSHRSRTTIRRF
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atggaatgctacgatgccgacgacgacgttttgatggagatggaggcgggtgaggtccaa
actgctcacttcttcgctcccaatccatcctactttcctctacaatcggttgagggatgg
actttattggtcactggagttcatcaagaggctgaggaacgcgatgttcttgatctattt
ggggagtttggggaggttaagagtttgcatctgaatctcaaccatcgcactggatatctt
atggggtatgctctgattgaatatgacaactttgaggcagctcaggatgcaatatccaca
atgaatgggactgaactttttgattctaccatctctgttgattgggctttctgtcgtgat
ccttcaaatgccagttatttgagatccccacattcacaccgatcaaggactacaatcagg
agattctga
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