Quercus lobata (valley oak): 115954057
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Entry
115954057 CDS
T07350
Name
(RefSeq) WD repeat-containing protein DDB_G0290555-like
KO
K14841
ribosome biogenesis protein NSA1
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
qlo03009
]
115954057
Ribosome biogenesis [BR:
qlo03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
115954057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR36-Utp21_1st
EIF3I
WD40
Beta-prop_WDR3_2nd
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_ACSF4
WD40_Gbeta
AP1AR
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
115954057
NCBI-ProteinID:
XP_030927770
UniProt:
A0A7N2M0C6
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All DBs
Position
7:2478..11251
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AA seq
472 aa
AA seq
DB search
MPRTTTLECPGCPSLRALTFDALGLIKVIEAKGSQGGAPRVVERWGELDSSKCVLAASIN
DRKDDLLLAVARKTGMIEVLSAINGDIRFTVSNANEDGPRLADDAVVGLHLFAGQGLELT
SRSYILLACTTKGNTSMRSIEVTDSPASSTSIGLSNTWSVCGSGNILCSKVDGSEKYAIF
GGKSVEMNMWDLDNCTKIWAAKSPPKNSLDIFTPTWFTSSTFLSKDDHRKIVAGTNSHQV
RLYDISAQRRPIISFDFGETPIKSVTEDLDGYTVYVGNGSGDLASFDMRTGKLLGCFLGK
CSGSIRSIARHPELPVIASCGLDSYLRLWDIKTRQLLSAVFLKQHLTNVVFDSSFADEEV
KPSIAADLPLNAERIANETEIRDEEETLPVKRKKASKEEERRKKKKATKENEGNKKTSKE
NNGSKKKASKENEGSKKLKSKKSKRSKCEIHDESCLCVQSKAPESNIDMHYD
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtacaaccacattagagtgtcctggttgcccttctcttcgagctctaaccttc
gatgcacttggtctcatcaaagttattgaagctaagggtagtcaaggaggggctcctaga
gtggtggagaggtggggtgagctggactcatcaaaatgtgtacttgctgcttctatcaat
gatcgtaaagatgacctgttattagcagtggcgagaaaaactggcatgattgaggttctc
agtgcaattaatggggatattcgtttcacggtttctaatgccaatgaggatggtcctaga
cttgcggatgatgctgttgttggtttgcatttatttgccggacagggattggagttgaca
tctaggtcttatattttgcttgcttgtacaacaaaaggaaacacaagcatgaggtccatt
gaagttactgattcacctgcaagttctacgtctattggtttgtcaaacacatggagtgta
tgcggttctggcaacatcttatgttctaaagtggatggaagtgaaaaatatgctatattt
ggagggaagagcgttgaaatgaacatgtgggatcttgacaactgtactaaaatctgggct
gccaaatctcctcctaagaacagtcttgatatttttaccccaacctggtttacatcatca
acattcctaagtaaggatgatcaccgcaaaattgtggctggcaccaacagccatcaggtt
cgcctctatgatatttccgctcaacgaagacctattatctcatttgattttggggagacg
cctatcaaatcagtaactgaagatttagatggctatacagtctatgtagggaatgggtct
ggtgaccttgcttcttttgacatgcgcacaggaaaattattggggtgctttttgggaaaa
tgttctggaagcattagatctatagccaggcacccagagcttccagtgattgcatcttgt
ggactggacagttatctacgcttatgggatataaagactcggcaacttctgtctgcggtt
ttcctaaagcagcatcttacaaatgttgtcttcgactctagttttgctgatgaagaagtt
aaaccttctatagcagcagatctaccactaaatgctgaacgaattgctaatgagactgaa
atcagagacgaggaagaaacactgcctgtgaaaagaaaaaaggcatcaaaagaagaagaa
agaaggaagaagaaaaaggcaacgaaagaaaatgaaggaaacaagaagacatcaaaagaa
aacaatggaagcaaaaagaaggcatcgaaagaaaatgagggaagcaagaagttaaaatcc
aagaaaagcaaaagatcaaaatgtgagattcatgatgaatcatgcttgtgtgtacaatcc
aaagcgccggagtcaaacattgacatgcattatgactag
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