Quercus lobata (valley oak): 115954079
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Entry
115954079 CDS
T07350
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo00040
Pentose and glucuronate interconversions
qlo01100
Metabolic pathways
Module
qlo_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115954079
Enzymes [BR:
qlo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
115954079
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
ThermoDBP-RP_arch
Motif
Other DBs
NCBI-GeneID:
115954079
NCBI-ProteinID:
XP_030927799
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Position
7:complement(43770023..43778424)
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AA seq
393 aa
AA seq
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MAYLRSSLVLALLSMFSSLVLAASSITYDVVSLGAIADGKTDSTQAFVSAWTKACASVSS
AMIYVPAGRFYLGQVVFSGPCKNNAITVRIAGTLVAPSDYTVLGNTGTWLLFEQVNGVTI
SGGILDGQGTGLWSCKASGNGCPSGATTLEFSNSNNIVVSALTSLNSQLYHIVVNGCQNV
KMQGVKVIAPGNSPNTDGIHVQLSSSVTILNSKIGSGDDCISIGPGTTNLWIENVACGPG
HGISIGSLGKDQQEAGVQNVTVKTVTFTGTQNGVRIKSWGRPSNGFARNILFQHVTMQDV
QNPVVIDQNYCPSNEGCPGQVSGVQISDVTYQDIHGTSATEVALKFDCSSKYPCSGIRLE
NVKLTYNNNQVAQASCVNAAGTSTGFVQPMGCL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggcatacctcagaagctctcttgtcctagcacttctctctatgttcagttctttagtg
ttagctgcttcttctataacatacgatgtggtgagtttgggagcaatagcagatggaaaa
actgactcaactcaggcttttgttagtgcatggacaaaagcttgtgcctctgtaagttct
gccatgatttatgtgccagcagggaggttctacctcgggcaagtggttttcagtggacca
tgtaagaacaatgctatcactgtgcgcatagctgggacacttgtggccccatcagactat
acggtccttggaaatacaggaacctggcttttgtttgagcaagttaatggggttaccata
tctggtggaattcttgatggccaaggcactggtttatggtcttgcaaagcctctggcaat
ggttgtccttctggagccacgacattggaattttccaactcaaataatattgtggtcagt
gcattaacctccttaaatagccaattgtaccacattgtcgtaaatggctgccaaaacgtg
aaaatgcaaggtgtcaaggtcattgcgcctggcaatagcccaaacactgatggcattcat
gttcaattatcttcaagtgttacaattctcaactctaagattgggtccggtgatgattgc
atctcaattggccctggtaccactaacttgtggattgagaatgttgcatgtggacctggg
catggaattagcattgggagtttaggcaaggaccaacaagaggctggtgtacaaaatgtt
acagttaaaacagttacttttaccggtactcagaatggggtgagaattaagtcatgggga
aggcctagcaatgggtttgctagaaacattctttttcaacatgtcactatgcaagatgtc
caaaatccagttgtaattgaccaaaattattgccccagcaatgaaggttgccctggtcag
gtttctggtgttcaaattagtgatgtgacataccaagacatccatggaacatcagctaca
gaggttgctttgaaatttgattgtagttcgaagtacccatgctcgggaataagattggag
aatgtaaagctcacttacaataataatcaagtggcccaagcttcatgtgtcaatgctgct
gggacatctactggttttgtccagcccatgggttgcttgtag
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