Quercus lobata (valley oak): 115954099
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Entry
115954099 CDS
T07350
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
qlo03009
]
115954099
Enzymes [BR:
qlo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115954099
Ribosome biogenesis [BR:
qlo03009
]
Eukaryotic type
90S particles
Helicases
115954099
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
UTP25_NTPase-like
Motif
Other DBs
NCBI-GeneID:
115954099
NCBI-ProteinID:
XP_030927828
UniProt:
A0A7N2R8D2
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Position
7:45159041..45163617
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AA seq
536 aa
AA seq
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MEKDPSFLFSGIHFNKKKFSNDFAKFLEKKGRDINESEEPREDSSFIESGKSEEKEGKLS
VKKRKRKSVGSGETVQGFDVFKSSKSAVKSVEVNEENDEAENGPSKKLKELNRQLERDSL
SRKKYNIHVSGNNVATPLQNFDELSSRFGCEPYLLRNLKELGFKEPTPIQRQAIPILLSG
RDCFACAPTGSGKTLAFACPMLMKLKHASTDGIRAVILCPTRELAAQTTRECKKLAKGKK
FRIKLMTKQLVGKADLSKLPCDILISTPLRLRLAIRKKKINLSRVEYLVLDESDKLFELG
MLKQIDSVVKACSNPSIIQSLFSATLPDSVEELARTRMHDAVRVIIGRKNTASELIKQKL
VFAGSEEGKLLALHQSFAESLNPPILIFVQSKERAKELYGELAYDKIRVDVIHSDLSQLQ
RDNVVDDFRAGKTWVLIATDVIARGVDFKGVNCVINYDFPDSYNAYIHRIGRTGRAGRTG
EAITFYTEADLPFLRNIANSMKSSGCEVPSWIMALPKLKWKKHRPRRDSISTQSKD
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagacccatcttttttgttctctggaattcacttcaacaagaagaagttctcc
aacgatttcgccaagttcctggagaagaaagggagagatataaacgaaagtgaagaaccg
agagaggattcaagtttcattgaaagtggaaaatccgaagagaaggaaggaaagctctct
gtcaagaagcggaaacgaaagtctgtgggttctggggaaacggtacaaggatttgatgtc
tttaagagttcaaaatcagctgtaaaatctgtagaagtgaatgaagagaacgatgaagcc
gaaaatgggccctctaaaaaactaaaggaattgaataggcaactagagcgggattcgttg
tcgcgtaagaagtacaacattcatgtttctgggaataatgtagccaccccacttcagaat
tttgatgaattaagctcgagatttgggtgtgagccctatttgttacgcaatttgaaagaa
ctaggatttaaagagccaacaccaatccaaaggcaggctattccgatccttttatctggc
cgggattgctttgcgtgtgctccaactggatctggtaaaacactggcttttgcatgtccc
atgcttatgaaacttaagcatgcatctactgatggcatccgagctgttatcctctgtcct
acccgagagttagctgctcagacaaccagagagtgcaagaaattggctaaagggaaaaaa
tttcgcatcaaattaatgacaaaacagctagtaggaaaagctgatttgtcaaagctgcct
tgtgatatactcatatcaacaccacttaggttaagattggctattcggaaaaaaaagatc
aacttaagtagggttgagtatcttgtcctggatgagtctgataagctatttgagcttggt
atgttaaagcagattgattctgtggtcaaagcttgctcaaatccttcaataatacagtcc
ctgtttagtgctacattgcctgactctgttgaggagcttgcacgcacaagaatgcatgat
gctgttcgagttattattggcaggaagaacactgcttcagaattgattaaacagaaattg
gtttttgccgggagtgaagaagggaaacttcttgctcttcatcaaagctttgcagagagt
ttgaatccacccatattaatctttgttcaaagcaaggagcgggcaaaggaactatatggt
gaactggcatatgataaaatcagagttgatgtcatccattctgatttgtcccaattgcag
cgagataatgttgtcgatgacttcagagctggcaaaacatgggttttgattgccactgat
gttattgcccggggtgtggattttaaaggtgtcaactgcgtgatcaattatgattttcca
gactcttataacgcatatattcacaggattggtcggacaggcagagcagggaggacagga
gaagctattactttttacactgaggcagatcttccctttctgcggaacatagctaattcg
atgaaatcctcaggttgtgaagtaccatcttggatcatggcattgcccaaactgaaatgg
aagaagcaccgtccacgaagagattcaatatcaacccaatcgaaagattag
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