KEGG   Quercus lobata (valley oak): 115954153
Entry
115954153         CDS       T07350                                 
Name
(RefSeq) protein CIA1-like
  KO
K24730  cytosolic iron-sulfur protein assembly protein CIAO1
Organism
qlo  Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:qlo03036]
    115954153
   03400 DNA repair and recombination proteins [BR:qlo03400]
    115954153
Chromosome and associated proteins [BR:qlo03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    115954153
DNA repair and recombination proteins [BR:qlo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     115954153
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_EML WDR90_beta-prop_4th Beta-prop_DCAF12 NBCH_WD40 eIF2A B-prop_COPA_B_2nd Beta-prop_ELP1_1st Me-amine-dh_H
Other DBs
NCBI-GeneID: 115954153
NCBI-ProteinID: XP_030927915
UniProt: A0A7N2M5H2
LinkDB
Position
7:39067707..39073431
AA seq 360 aa
MEFHEGACELKLLQTLDGHTDRVWSLAWNPATGTAETPLVFASCSGDKTVRIWEQNPSPS
SSSSSYSSWNCKAVLEDTHTRTVRSCSWSPSGKLLAVASFDATTSIWENVGGDFECVSTL
EGHENEVKSVSWNAAGTLLATCGRDKSVWIWEAQPGNEFECVSVLQGHSQDVKMVLWHPT
LDVLFSCSYDNTVKVWADDDDDWQCVQTLGEPNNGHSSTVWALSFNKTGDKMVTCSDDLT
LKIWEMDSTSMQSADGYAPWRHLCTITGYHDRTIFSVHWSSEGIIASGAADDAIRFFVED
KDGLVDGPSYKLLLKEEKAHGMDINSVQWSPGEKRLLASASDDGTVKIWELASLCTGNGY
NT seq 1083 nt   +upstreamnt  +downstreamnt
atggagtttcacgaaggagcttgcgagctgaaactactccaaactctcgatggccacacc
gacagagtatggagcctcgcttggaacccggccaccggcaccgccgaaacccctctcgtc
ttcgcctcttgcagcggcgacaaaaccgttcgaatctgggaacaaaatccttctccttct
tcttcctcttcttcctattcctcttggaactgcaaggcagttttagaagacacgcacacg
agaaccgtccgatcttgctcctggtctccatcaggaaaattactagccgttgctagcttc
gatgccaccacttcaatttgggaaaacgttggtggtgatttcgaatgtgtttccacatta
gagggtcatgaaaatgaagtgaaaagcgtgtcgtggaacgcggccgggacgctgctcgcc
acgtgtggccgggataagtcggtttggatttgggaagcgcagccggggaacgagttcgag
tgtgtttcggttttgcaaggacattcacaggatgttaagatggttctgtggcatcctaca
ttggatgttttgttctcttgtagctatgataacactgttaaggtttgggcagacgatgat
gatgattggcagtgtgttcagactttaggtgaacctaacaatggtcattcttcgacggtt
tgggcactttctttcaacaaaaccggagataaaatggtcacatgtagtgatgatcttact
ctaaagatatgggaaatggacagcacaagtatgcaatctgctgatggctatgctccttgg
agacatctctgcactatcacaggttatcatgatcgaacaattttctcagttcattggtca
agtgagggtattattgccagtggagcagctgatgatgccatacgattttttgtggaggac
aaagatggtttggttgatggaccttcatataagttgctgctgaaggaggaaaaggcacat
ggcatggatataaattcagtgcaatggagccctggggaaaaacgactattggcttctgca
agtgatgatggtacggtcaagatatgggaactggcttcactatgtacaggaaatggctac
tag

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