Quercus lobata (valley oak): 115954322
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Entry
115954322 CDS
T07350
Name
(RefSeq) transcription initiation factor TFIID subunit 12
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115954322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qlo03021
]
115954322
03036 Chromosome and associated proteins [BR:
qlo03036
]
115954322
Transcription machinery [BR:
qlo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
115954322
Coactivators
SAGA/TFTC/STAGA complex
115954322
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
115954322
STAGA complex
115954322
TFTC complex
115954322
SAGA complex
115954322
SLIK complex
115954322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
Motif
Other DBs
NCBI-GeneID:
115954322
NCBI-ProteinID:
XP_030928106
UniProt:
A0A7N2M666
LinkDB
All DBs
Position
7:39452641..39461000
Genome browser
AA seq
547 aa
AA seq
DB search
MEQPPPQQQQTPTPTTTTATATDSSAATTTTTTATTSFQPSESPPLSTPQQPPPQPPSST
PTPSPIPPSPNPNPTLTPTQNAKPSIPNPSQPQLQPQPRPLSSFARPPQPPPPQQQQPHF
SHFSSLPSSSSPAGSPSIPAQRGGIAIGVPAHHPNTAASPQPAPFSSSFGHHFTGLTRSA
VNVPESVSSSNASQARPTMQGMPGIGMLGSLGSSSQLRPAGISAHHPQRPVQSSLRPQSS
PNNQPPTSQNLQGHSLMRLQPVGSPGSPSPNTSQNMQTVNQPWLSSGSQGKPPLPSPSNR
HQVNSQMQQRAHLPQQQHHPLPTGSQQQHMPSLQQQQQQPTPSSQLQEHYGQQFPPSRVP
QAATHQPQITRVQGSGNQKPSSLAMVQPNTVQAVAQNRTAIAESDESCNRILGKRSIHEL
VSQIDSSEKLDPEVEDILVDIAEDFVDSITTFGCSLAKHRKSTTLEAKDILLHLERNWNI
TLPGFGGDEIKSYRKPLTNDIHKERLVAIKKSMVATETATKISSGQAAGNAKGNLAKAPA
NPLAPQM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaccaccaccacaacaacaacaaacccccactcccaccactaccaccgccacc
gccactgactcctccgccgccacaaccaccacaacaaccgccaccacatcatttcaacca
tctgagtctccgccactatcaactccacaacaacccccaccacagccaccctcttcaact
ccaaccccttcacctatccctccctcccctaaccctaaccctactctcactcccacccaa
aacgctaagccctctatcccaaacccttcacaaccacaactgcaaccgcaacctaggccg
ctctcttcgtttgccagaccaccacaaccgccgccgccacaacagcagcagccacacttt
tcgcacttctcgtcgctcccttcttcgtcttctccggccgggtctccctccatccccgcc
cagagaggcggcattgctatcggtgttcccgcgcaccaccccaacactgccgcttctcct
caacccgcgcccttctcttcctccttcggtcaccacttcactggcctgacccgctccgcc
gtcaacgtgcccgaatccgtctctagttccaatgcttctcaggctagaccaacgatgcaa
ggaatgccgggaattgggatgctgggatcgcttggttcaagctcgcaactgcggccagct
gggatttcagcccaccatccacagagaccagttcagtcatctcttagaccgcaatcgtcc
ccaaataaccagccccctacttcccaaaatcttcaagggcatagccttatgagactccaa
ccagtgggatctcctggttctccatcaccaaatacctcacaaaatatgcaaactgttaat
caaccatggctgtcatctggatcacaagggaagcctcctttaccatctccttcaaatagg
catcaggtcaattcacaaatgcagcaacgagcacatcttcctcaacaacagcatcatccg
ttgccaacaggttcacagcaacaacatatgccatctttgcaacagcaacagcaacagcct
acaccatcaagtcagttgcaggagcattatgggcaacaatttccaccatcaagggtcccg
caagctgcaacccatcaaccacaaataacaagggtccagggctcaggaaatcagaagcct
tcctctcttgcaatggtgcagcctaacacagtccaggctgtggcccagaatagaacagct
attgccgaaagtgatgaatcttgtaacaggattcttggcaaaagaagcattcatgagcta
gtcagccagattgattcatcagagaagttggatcctgaagttgaagacattcttgttgat
attgcagaggattttgttgattctattacaacatttggttgctcattggccaagcatcgg
aaatcaacaacattggaagcaaaagacatacttttacatcttgaaagaaactggaatatt
acacttcctggttttggtggtgatgagattaagagctacagaaaaccgcttacaaatgat
attcacaaggaacgtcttgtagcaataaagaaatcaatggtagcaactgagacagcaacc
aaaatttcttctggacaagctgctggaaatgcaaagggtaatctggccaaggcacctgcc
aatccattggctccccaaatgtaa
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