KEGG   Quercus lobata (valley oak): 115954533
Entry
115954533         CDS       T07350                                 
Name
(RefSeq) proliferating cell nuclear antigen-like
  KO
K04802  proliferating cell nuclear antigen
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo03030  DNA replication
qlo03410  Base excision repair
qlo03420  Nucleotide excision repair
qlo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    115954533
   03410 Base excision repair
    115954533
   03420 Nucleotide excision repair
    115954533
   03430 Mismatch repair
    115954533
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:qlo03032]
    115954533
   03400 DNA repair and recombination proteins [BR:qlo03400]
    115954533
DNA replication proteins [BR:qlo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    115954533
DNA repair and recombination proteins [BR:qlo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     115954533
   MMR (mismatch excision repair)
    Other MMR factors
     115954533
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    115954533
SSDB
Motif
Pfam: PCNA_C PCNA_N Rad1 Rad9 Ribosomal_L14
Other DBs
NCBI-GeneID: 115954533
NCBI-ProteinID: XP_030928263
LinkDB
Position
8:complement(62468986..62471712)
AA seq 322 aa
MLELRLVQGSLLKKVLESVKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHY
RCDRNLSMGMNLNNMAKMLKCAGKDDIVTIKADDGGDTVTFMFESPTQDKIADFEMKLMD
IDSEHLGIPEAEFQAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANI
VCRQNTTVDKPDDATIIEMQEPVSLTFALRYMNSFTKATPLSNQVTISLSSELPVVVEYK
VAEMGYIRFYLAPKLEEDDIENQAEARPEVNKKPKDEPIVDAKPISEIKPKLEVKAEDEN
KPQIESTTAVGSKEEIDLMDDE
NT seq 969 nt   +upstreamnt  +downstreamnt
atgctagagctaaggctagtccaagggagtctattgaagaaggttctggaatcggtcaag
gacctcgtcaatgacgccaacttcgactgctccgccaccgggttctcgctccaggccatg
gattccagtcacgtggcactcgtggctcttcttctcagatctgagggcttcgagcactac
cgctgtgaccgtaacttgtccatggggatgaacctcaacaacatggctaaaatgctcaag
tgtgctggtaaagatgacattgttaccattaaggccgatgatggtggcgatactgtcact
ttcatgttcgaaagccctactcaagacaagattgccgactttgagatgaagctgatggac
atagacagtgagcatcttggaatccctgaagcagagttccaagccatcgttaggatgcca
tcagctgaatttgcaaggatttgcaaggaccttagctccattggtgatactgttgtgata
tctgtgacaaaggaaggtgtgaagttctctaccagaggtgatattgggactgccaatatt
gtttgcaggcagaatactactgtggacaagccagacgatgctaccataatagaaatgcag
gagccagtctcgttgacctttgcgctaaggtacatgaactcattcacaaaggcaacccct
ttgtcaaaccaagtcacaatcagcctgtcttcagaactgcctgtggtagttgagtacaaa
gtagcagagatgggttacataaggttctacttggctcccaagctagaagaagatgacatt
gaaaatcaagcggaagccaggcctgaagtgaacaagaagcctaaagatgagcctatagtg
gatgccaagcctatatcggagattaagcctaaattggaggtcaaggctgaagatgagaat
aagcctcaaattgaaagcaccactgcagtgggatccaaggaggaaattgatcttatggat
gatgagtag

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