Quercus lobata (valley oak): 115954712
Help
Entry
115954712 CDS
T07350
Name
(RefSeq) trafficking protein particle complex II-specific subunit 130 homolog
KO
K20307
trafficking protein particle complex subunit 10
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qlo04131
]
115954712
Membrane trafficking [BR:
qlo04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
115954712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Foie-gras_1
bL31_N
TPR_2
TPR_1
Motif
Other DBs
NCBI-GeneID:
115954712
NCBI-ProteinID:
XP_030928497
LinkDB
All DBs
Position
8:complement(19099849..19128691)
Genome browser
AA seq
1257 aa
AA seq
DB search
MANFLAQFHTIKNSSDHLVIAVEDVSDLWPIVKSEFEGRLPFKRASLNNKTRNSVFVENL
TAEFILTTDSRLRSRFPLEQSLFWFREPYATVVLVTCEDLDEFRTILKPRLKLIVQNDER
EWFIVFVSKAPPNNDQATKLAKKVYAKLEVEFSSKKRERCCKLDIQSPEANFWEDLESKI
MESIRNTLDRRVQFYEDEIRKLSEQRLMPVWNFCNFFILKESLAFMFEMAHLFEDALREY
DELELCYLETVNMPGKLRDFGGVDRGDDQAALLNPGNKPLTQIVQDDSFREFEFRQYLFS
CQSKLLFKLKRAFEVASRGYSFIISFSKALALRESILPFCMREVWVITACLALINATASQ
YNDGPPDIEKEFYRLKGDLYSLCRVKFMRLAYLVGFGAEIERSPVNSALLSMLPWPKPAV
WPLVPPDASSEVLVKEKMILQETPRVKHLGIQRKPLPLEPSLLLREANRRRASLSAGNMV
EMFEGRPIFNDGSGSDASTKMSPSQKVRASSMSRTNSSPGGFESSIDRPMRLAEIYVAAE
HALQHTISNTDLWKSLSSLEEYEKKYLELTKGAADNYHNSWWKRHGVVLDGEIAAVCFKH
GNFDLAAKSYEKVCALYAGEGWQDLLAEVLPSLAECQKILNDQAGYLSSCVRLLSLDKGL
FLTKEREAFQSEVLRLAHSEMKDPVPLDVSSLITFSGNPGPPLELCDGDPGTLSVTVWSG
FPDDITLDSLSLTLMATYNGDEGVKALRCPSAIVLKPGRNIITLPLPPQKPGSYVLGVLT
GQIGHLRFRSHSFSKGGPADSDDFMIYEKPTRPILKVFKPRALVDLTASISSALLINEPQ
WVGIIVRPINYSLKGAILHIDTGPGLKIEESHVIEMQSYVDVSQIAANMAKSDAAQKEGS
LAVDKNFEQLRLHDGRIEFPNWANNVTSILWIPLCAISDGLARGSSSVSPLRQSIVDGMR
TIALKLEFGVSHNQIFERTLAVHFTDPFQVSTRIADKCNDGTLLLQVILQSEVKATLTIN
DAWLDLQDGFVHTTKGDGRPTSGFFPLVISPYSRAAILFSICLEMLNAEDEAKALRPESI
LNIKYGISGDRTTGAHPPVAVESPGPEGARQDLIFRSSLVLQRPVLDPCLAVGFLPLPSG
GLRVGQLVSMEWRIERLKDFEENEVSKHNNEVLYEVGANSDNWMLAGRKRGHVSLSTKQG
SRIVISILCMPLVAGYVRPPQLGLPEVDETNISCNPAGPHLVCVLPPALSSSFCIPA
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactttctagctcagttccacaccatcaagaattcctctgatcacctcgttatt
gcagtggaagatgtgagcgatttgtggcccatcgttaagagtgaatttgaggggcggtta
ccattcaaaagagcaagtttaaacaacaagacccgtaactctgtgtttgtagagaatttg
actgctgagttcatattaacaacagattctagacttcgtagccggttccctttggagcaa
tcattattttggtttcgggagccatatgcaacagtggttcttgttacctgtgaggatctt
gatgagttcaggaccatccttaaaccacgcttgaaattgattgtccaaaatgatgagcgg
gaatggtttattgtatttgtgtctaaagctcccccaaataatgatcaagccacaaaattg
gcaaaaaaagtatacgccaaacttgaagttgaatttagctccaaaaagagggaaaggtgc
tgcaaattagatatacagagccctgaggcaaatttttgggaagacctggaatccaagatt
atggagtccatccgaaatacattggataggcgtgtacagttttatgaggatgagatacgc
aagctcagtgaacaacgcttaatgccagtttggaacttctgtaatttttttatcttgaag
gaaagtttggcttttatgtttgagatggctcatctatttgaagatgcattgcgcgagtat
gatgagttagaactctgctatttggaaacagttaatatgcctgggaaactgagagacttt
ggaggagtagaccgtggtgatgatcaggctgctttgcttaaccctgggaacaaaccattg
acacagattgttcaagatgactcgtttagggagtttgaatttcgacagtatctcttttcc
tgtcaatcaaagcttttatttaagctaaagcgggcctttgaagttgcatcaaggggttat
tcattcataataagcttctcgaaggccctggctttgcgtgagagtattctacccttttgt
atgcgtgaagtttgggtaataactgcttgcttggctttgatcaatgcaactgcttctcaa
tataacgatggaccacctgatatagaaaaggagttctaccgccttaagggtgatctttat
tccctgtgcagagttaagttcatgaggcttgcatatttagttggatttggagctgagata
gaaagaagtcctgtcaacagtgctttactcagtatgctaccttggcccaagccagcagta
tggcctttagttccacctgatgcttcatctgaggttctcgtgaaagaaaagatgattctc
caagaaactccaagagtcaagcacttgggtattcagaggaaaccattgcctcttgaacct
tcccttcttttgcgtgaggcaaatcggcgaagggcttctctttctgctggaaatatggtt
gaaatgtttgaaggtcgccccattttcaatgatggatcaggctcagatgcatccacaaag
atgtccccatcacaaaaagtccgtgcaagttccatgtcacgcactaactcttcaccagga
ggttttgagagctcaattgatcgacccatgagacttgctgagatttatgttgctgctgag
catgctttgcagcatacaatttctaatactgatttatggaaatctttatcatctttagag
gagtatgagaaaaaatatctagagctaactaagggtgctgctgacaattaccataattcc
tggtggaaaagacatggagttgtccttgatggtgaaatagcagctgtctgcttcaaacat
ggaaattttgatctggctgcaaagtcatacgagaaggtttgtgccctatatgcgggtgaa
ggatggcaggatctattggctgaagtcctgcccagtttagctgagtgtcagaagatactt
aatgatcaagctggctacctatcatcttgtgtgagattactttcactagataaaggctta
tttttgaccaaggaacgtgaagcttttcagtcagaagttcttcgccttgcacacagtgaa
atgaaggaccctgtacccctagatgtgtcttctttaattacattttctgggaatcctggg
cccccattggagctctgtgatggtgatcctggtactctatctgtgaccgtttggagtggc
tttcctgatgatataactcttgattcactcagtctcacattgatggctacatataatggt
gatgagggtgttaaggcattaaggtgcccttctgctattgttctaaaacctggtcggaat
attattacactgcctttgcccccccaaaaaccaggttcctatgtcttgggggttcttact
gggcagattgggcacttgcggttcagatctcatagcttttcgaagggtggccctgcagac
agtgatgattttatgatttatgaaaagccaactaggcctatcttgaaggttttcaaacca
agagccctggttgatcttactgcatctatttcatctgctttgctgataaatgaacctcag
tgggttgggatcatagtacggccaatcaactactccctgaaaggcgctatattgcatata
gatactggtccaggtctgaagattgaagagtcacatgtcattgagatgcagagttatgtt
gatgtgtcgcagattgctgctaacatggcaaagtctgatgctgctcagaaagaaggttcc
ttggcagttgataaaaattttgagcagttgaggctccatgatggcaggatagagtttcca
aattgggcaaacaatgtgacttctattctgtggattcctttatgtgccattagtgatggg
cttgcaagaggatcatcttcagtttcccctctgagacagagtattgtggatggaatgagg
acaatagctctgaagcttgaatttggagtatctcacaaccagatatttgagaggaccctg
gctgtccattttactgaccctttccaagtgagcacacgtattgcagataaatgcaatgat
ggaactttgcttctacaggtgatactacaatcagaagtgaaggccactttaaccataaat
gatgcttggcttgatcttcaagatggatttgttcatactacaaaaggtgatgggagacca
acttcaggcttcttcccacttgtcatctctccatattccagagcagcaatcctgttcagc
atatgcttagagatgttgaatgctgaagatgaagctaaggcactgcgcccagagagcata
ttaaatatcaaatatggcatttcgggtgatagaaccactggagcacacccacctgtggct
gtagaatctcctggacctgagggtgctagacaggacttgatcttcaggagttctcttgtt
ttgcagagacccgtgcttgacccatgtctggctgttggttttcttcctctgccttctggt
ggccttagagttgggcaacttgttagcatggaatggaggattgaaaggttaaaagacttt
gaggagaatgaagtttctaaacacaataatgaggtgttatatgaagtcggtgcaaattca
gataattggatgcttgctgggaggaaaagagggcatgtttctctctccacaaagcaaggt
tcaaggatagttatctcaatattatgcatgccgctggtggcaggctatgttcgtccccca
caacttggactgccagaagtcgatgagacaaatataagttgcaatcctgctgggccccac
ctggtttgtgtcttgcctccagctctcagctcctccttctgcattccggcatga
DBGET
integrated database retrieval system
