Quercus lobata (valley oak): 115954830
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Entry
115954830 CDS
T07350
Name
(RefSeq) disease resistance protein RPM1-like
KO
K13457
disease resistance protein RPM1
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
115954830
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
NB-ARC
LRR_14
Rx_N
WH_DRP
LRR_R13L1-DRL21
LRR_8
AAA_22
LRR_4
LRR_RPS2
NPHP3_N
Viral_helicase1
UvrC_RNaseH
AAA_16
AAA_14
AAA_18
Roc
AAA_25
AAA_33
Motif
Other DBs
NCBI-GeneID:
115954830
NCBI-ProteinID:
XP_030928648
LinkDB
All DBs
Position
8:3173103..3177199
Genome browser
AA seq
932 aa
AA seq
DB search
MAETAVSIVIEHVLPLLVQEVRLQKGFQSKVTSIKGQLEIIQSFLKDADIRAEKEDVSNV
VKAWVKQVREEAYQIEDVIDEYILHFAKQPFGKKQCFHFHQNFFQFAKKLKARYVIAYKI
QDISNSLKEKREMAVSYHFNTIEQGGPSNNARSVTWHDPRMAALFIEEAEVVGIESHRNR
LINWLVEGPLNRMVISTVGIGGVGKTTLIKKVYENDKVATHFDCHAWITVSQSYKTEELL
RNMIKQFYKARKESIPVEIDAMEQTTLMEHLRLYLHEHRYVVVFDDLWEKGFWDCIELAL
PKNEKGSRILITSRNEDIAPSDYLYKQPVLPLEKAWVLFCKKVFQHEGGHCPLGLFELSH
AVVQRCEGLPLAIVAIGGLLSTKDKVLNEWLKFHNSLSSELKSNPHLKNIAKILSLSYHD
LSYNLKACLLYFGMFPEDYYINCARLIRLWNAEGFVKEMQGITLEEVAQGYLNQLIHRSL
VPVEQVDFIGKTRSCRIHDMMLEVILSRSKELDFHLASMQNYLNFNRIARRLSIQNNVKT
SLQSATSYETRSILILGVDEVPNSFLSTCFANFKLMKIMDCEGAPIDYIPKEVGNLFHLR
YLSLRDTKVQILPKSIGKLHNLETLDLKRSLVSELPVEISGLRKLRYLAAYNHNRATNFN
IDSYCGVKIPNGIGLLKSLQKLFQIEATSSTLITELGSLSQLKKLTICKLKKENGIDLCT
VIQKMSHLQTLEILATSEEEVLNLQSLPSRPPLLQTLSLHGRLEKLPKWIPKLKSIVQIV
LFWSKLMEDPLKVLQSLPNLMSLSLRDGYEGEQLHIEGRSFQKLKELRFQKLGGLNRLII
DEGALPFLEFLEIGECPQLKEVPSSIHHLKSLKKLKFTEMPTEFVLSLQPDEGPDFGKVE
HIPCVEFWYRTHGDYYISYQLGNSAFLKRLRN
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaactgcagtcagtatagttatagagcatgtgttaccgttgttagtccaagaa
gtgagattgcaaaagggtttccaaagcaaagttacaagcatcaaaggtcaattggagatt
attcagtctttcctgaaggatgcagatataagggctgaaaaggaagacgtgagcaacgtt
gtaaaagcatgggtgaaacaagtaagggaagaggcttatcagatagaagatgtcattgat
gaatacatacttcattttgcaaaacaaccttttgggaaaaagcaatgcttccattttcac
cagaattttttccaatttgccaaaaaactgaaagcaagatatgttatagcctataagatt
caagacataagcaatagtctcaaggaaaagagagagatggctgtaagctatcacttcaac
actatagagcaagggggaccaagcaataatgcgagaagtgttacatggcatgaccctcga
atggcagcccttttcattgaggaagcagaggttgtgggcattgagtctcataggaacaga
ttgataaattggctagtagaaggaccattgaatcgcatggtgatttcaacagttggtatt
gggggggttggtaagaccactcttataaaaaaagtgtatgaaaatgataaggtggcaaca
cactttgattgtcatgcctggatcacagtgtctcaatcatacaagacagaggagctatta
aggaacatgataaagcaattctacaaggcaaggaaggagtctattccagtggaaattgat
gcaatggaacaaacgacactaatggagcatttaaggctatatttgcatgagcataggtat
gtcgtagtttttgatgatttatgggaaaaaggtttttgggattgcatagaacttgcttta
cctaaaaatgaaaaaggcagtagaatattaatcacatctcgaaatgaggatattgctcca
tctgattatttgtataaacagccagttctacctttagaaaaagcttgggttctcttttgc
aagaaggtgtttcaacatgaaggggggcattgtccccttggcttatttgagttatcacat
gctgttgttcaaagatgcgaagggttgccactagcaattgttgctattgggggtcttttg
tcaaccaaagacaaggttctcaatgaatggctcaaatttcataatagtcttagttcagag
ctaaaaagtaatcctcatctgaagaatattgccaaaattctatccctcagttatcatgat
ctatcttacaacctcaaagcttgcttattatattttggcatgtttccagaggattactac
attaattgtgcaagattaattcgactttggaatgccgaaggttttgtaaaagaaatgcaa
gggataacattggaagaggttgcacaaggctacttaaaccagcttattcacagaagcttg
gttccggtggaacaagtcgattttattggcaagactagaagttgtcgaattcacgatatg
atgcttgaggtcattctttctaggtcaaaggaattggattttcatttggcctcaatgcaa
aactacctaaattttaatagaattgctcgacgtctctcaattcagaacaatgtaaaaact
tctttgcagagtgctactagttacgaaactcgttctattctcattttgggggtagatgaa
gtgcctaattcttttctctctacttgttttgcaaacttcaagttaatgaaaataatggat
tgtgaaggtgctcctatagattacattcccaaagaagtgggaaacctattccatctaaga
tatttaagcctaagagatacaaaagtgcaaatccttccaaagtccataggtaaattgcac
aacctagagacgttggatttgaaacgttcccttgtgtctgagcttccagtagagattagt
gggcttcgtaagctacgatatcttgcggcctacaatcataacagagctactaatttcaat
atagattcttactgtggggtaaagataccaaatggcattgggcttttaaagtccttacag
aagctttttcaaattgaagccactagctcgacccttataacagaattgggaagtttgtca
cagttgaagaagctgacgatttgtaaattgaagaaagagaatgggatagatttgtgcact
gtgatacagaaaatgagccaccttcagacattggaaattttagcaacaagtgaggaagaa
gttcttaatttgcaatcactgccttctcgtcctcccctcctacaaactcttagcctacat
gggcgactagaaaagttgccaaaatggattcccaaactcaagagtatagttcaaattgtt
ttgttctggtcaaaattaatggaagatccattaaaggtccttcaatctctgcctaatttg
atgagtctttcgcttcgcgatggatacgaaggcgagcaattacatattgagggaagaagc
ttccagaaactcaaggagctaaggtttcaaaaattgggaggattgaataggctgataata
gatgaaggtgccctgccttttcttgaatttcttgaaattggagaatgcccacaactaaag
gaggtgccctctagcatccaccatctgaaaagcctcaaaaaactgaaatttacagaaatg
ccgaccgaattcgttcttagtctgcaaccagatgaaggccctgattttgggaaagtcgag
catattccctgtgttgaattctggtataggactcatggagactactacatttcgtaccaa
cttggtaattcagcatttttaaagcgtctgcgaaattga
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