Quercus lobata (valley oak): 115954924
Help
Entry
115954924 CDS
T07350
Name
(RefSeq) amino acid transporter AVT1C
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
115954924
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
qlo02000
]
115954924
Transporters [BR:
qlo02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
115954924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
115954924
NCBI-ProteinID:
XP_030928785
LinkDB
All DBs
Position
8:54912767..54925561
Genome browser
AA seq
548 aa
AA seq
DB search
MKNSVSDHSFYVESDEEEEEVEKEFDKAEENNEGNASDSSDSSADHQQQIKPGSYNTSWP
QSYRQSIDLYSSVQSPSIGFLGTPTLSRLGSSFLSSSLTRRHTPETLPTVTKPLLDEQQQ
QQRRSSHALLPPLPTRRYSIRKDEKPLVAHELPLSRQCSFGQAVLNGINVLCGVGILSTS
YAAKEGGWAGLSILFIFAALSFYTGILLRYCLDSAPGLETYPDIGQAAFGNFGRVAISII
LYVELYACCIEYIILESDNLSSLFPNANISLGGFELNSHVLFALMTTLAVLPTVWLRDLR
VLSYISAGGVIASVLVVLCLFWVGLVDGVGFHNKGTTLNLGTLPVAVGLYGYCYSGHAVF
PNIYTSMARPNQFPAVLLTCFGICTLLYAGVAVMGYKMFGDSIQSQFTLNLPQDLVATKI
AVWTTVVNPFTKYALTMSPVAMCLEELIPSNHSKSYIYSILIRTALVVSTLIVGLSVPFF
GLVMSLIGSLLTMLVTLILPCACFLSIVRGKITRLQGALCIIIISVGAVSCSFGTYSALS
KIVESLKR
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgaagaactctgtctcggatcacagtttttacgttgagagcgatgaagaagaagaggaa
gttgaaaaggaattcgataaagctgaagaaaacaacgaaggaaacgcttcggattcgtcg
gattcttcggctgatcaccagcaacaaatcaaacccggttcttacaatacctcttggcct
caaagttacaggcagtctatcgatttatatagtagtgtacaatctccaagcattgggttt
ctgggcactcctacactgtcaagattaggcagttcatttctttcctcatccctaacgaga
agacacactcctgaaacattaccaactgtcacaaaacctttgttagatgagcaacagcag
caacagagacgtagttcacatgctttgcttcctcctcttccaacgaggagatattccata
aggaaagatgagaaaccattggttgcacatgaactcccactttctcgccagtgctcattt
gggcaagctgtgctaaatggtataaatgttctatgtggagtcggaatcctttcaacttct
tatgctgccaaagaaggaggatgggctgggctctctattttgttcatatttgcagctctt
tctttttatactggaattctcctgcgctactgcttggatagtgcacctgggcttgagaca
tacccagacattggtcaagctgcatttggtaattttggccgggttgccatctcgataata
ttgtacgtggaactatatgcttgttgcattgaatatataattttggagagcgacaactta
tcctcactgtttccaaatgcaaatataagtttgggtgggtttgagttaaattcgcacgtt
ctgtttgcattgatgacaaccctggctgttcttcctactgtttggcttcgggacctcaga
gttcttagttatatatctgctggtggagttattgcatcagtcttggtggtcctttgcttg
ttttgggttggtctggtagatggagttggctttcataacaaagggacaacactgaacctt
ggaactcttcctgttgctgttggtctctatggttactgctactcaggacatgctgttttc
cccaacatatatacatcaatggcaagaccaaatcagtttcctgctgtcctcttaacatgt
tttggtatttgtactttgttgtatgccggggttgctgttatggggtacaaaatgtttgga
gactcaatacagtcacagttcactcttaacttgccccaggatttggttgccactaagatt
gctgtgtggacgacggtagtaaacccttttaccaaatatgcattaactatgtctcctgtt
gcgatgtgtttggaggagttgataccatcaaatcacagcaagtcgtatatatattccatc
ttgattagaacagcactggtggtatctaccttgattgtgggtctcagtgtccccttcttc
ggtctggtaatgtcattgattggatctttgctcacaatgcttgtaaccttgatacttcct
tgcgcttgtttcctgagcattgtgagagggaaaataacccggttgcagggagcactttgt
attataattatttcagtaggtgctgtatcgtgttcctttgggacatattcagccctctcc
aaaattgttgagagtttgaagcgttga
DBGET
integrated database retrieval system