Quercus lobata (valley oak): 115955261
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Entry
115955261 CDS
T07350
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
115955261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qlo03400
]
115955261
DNA repair and recombination proteins [BR:
qlo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
115955261
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
Motif
Other DBs
NCBI-GeneID:
115955261
NCBI-ProteinID:
XP_030929189
UniProt:
A0A7N2MEI2
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Position
8:52467803..52475428
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AA seq
689 aa
AA seq
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MARNKETLLLLLDVGPSMHSVLPEVEKVCSLLAEKKLIYSKYDEVGVILFGTEDTKNELT
KEVGGYQNVVVLRDTKVVDGDLVEALQQLPRGTRDGDFLDAIIVGMDILIKKFGETDKKK
KRICLITNALCPIKDSFEGTKEDQVITIAEQLAKHGMGMESIVVRGRLAGDANKRIMEEN
DVLLNIFSQKTCAKLVYVESPTSLFGALRTRNISPVTIFRGDLELSSKMKIKVWVYKKTS
EEKFPTLKKYSDKAPPTDKFATHEVKVDYEYRSVEDTSKVVPPEGRIKGYRYGPQVVPIA
PSEWDAVKFKPEKSVKLLGFTDAKNILRHYYMKDVNVFIADPGNTRAILAVSALARAMKE
KNKVAIVRCVWRNGQGSVVVGVLTPNVSDKDNTPDSFYFNVLPFAEDVREFQFPSFNNFP
ASWQPNEQQQEAADNLVKMLDLAPSGKEEALQPNFTPNPVLERFYRYLELKSKHPDAAVP
PLDETLKKMTEPDPEVLSQNKSVIDAFRRNFELKENPKLKKSTRRFLQEKPSGLKEGEGC
GDIAAQPVDSIKDTSVVKVENIGNLTPVQDFENMMSCRDGPEWIGKAIKDMKKRIFDLVE
DSFEGDNYPKALECLVALRKGCILEQEPKHFNDFLHHLCKFCQKNNLNCFCEFLASKELT
LISKTEAIDSEVTDDEARNFLVKSEPKTV
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggctcgaaacaaggagacattactattgttgctcgatgtgggaccgtcgatgcacagt
gttcttcctgaagttgaaaaggtctgctccttgctagcagagaaaaagcttatatacagt
aaatatgatgaagtgggtgttattttgtttggaactgaagacacaaaaaatgagctaacg
aaagaagtcggtggatatcaaaatgtagtggtgttacgagataccaaagttgttgatgga
gatcttgttgaagctttacaacagctccctcggggaactcgtgatggtgattttcttgat
gctattattgttgggatggatatactgataaagaagtttggagaaacagacaaaaaaaag
aaacgtatttgcctcataacaaatgcactgtgtccgattaaagattcatttgaaggaaca
aaagaagatcaagtcattaccatagctgaacaattggctaaacatggtatgggaatggaa
agtatagttgtgaggggaaggcttgccggggatgcaaataagagaataatggaagaaaat
gatgttctattgaatatattttcacagaaaacatgtgcaaagttggtgtatgtcgagagt
ccaacatcattgtttggtgcgctaagaactcgaaatatatctccagttacaatattcagg
ggtgatcttgaactcagctccaaaatgaagattaaggtatgggtgtacaagaaaacgtca
gaagaaaaatttcccactttgaagaaatattctgacaaagcacctccaactgataaattt
gccacccatgaggtcaaagtagattatgagtaccgaagtgttgaagatactagtaaagtt
gtacctccagaaggaaggattaaaggatatcgttatggacctcaagtagttcccatagca
ccttcagaatgggatgctgtcaagttcaaaccagaaaagagtgtaaaacttctaggattt
actgatgcaaaaaacatattgcgacattattacatgaaagatgtcaatgttttcattgct
gatccgggcaatacaagggcaattcttgcagtttctgccctagcaagagcgatgaaagag
aaaaataaggtggcaattgtgcgttgtgtttggagaaatgggcaggggagtgttgttgtg
ggggttctgacacccaacgtttctgacaaagataatactcctgattccttttactttaac
gtgcttcccttcgctgaggatgttcgagaatttcaatttccctccttcaacaatttcccg
gcatcatggcagcctaatgaacaacagcaagaggctgcagataatttggtcaagatgctt
gacctggcaccatctggcaaagaggaagcactgcagcctaactttacaccaaatcctgtt
ctggagcggttttatcgttatcttgaattgaaatcaaagcacccagatgcagctgtacct
ccgcttgatgaaactctcaagaagatgaccgaacctgatccagaagtactttctcaaaac
aagtctgttattgatgcatttcgcaggaattttgaactgaaagagaatccaaagctgaag
aaatcaactcggcgatttttgcaagaaaaaccatctggattgaaagagggagaaggttgt
ggcgacattgctgctcaacctgttgattccattaaagatacatctgtagttaaggttgag
aatattgggaatttgacgcctgtacaagattttgaaaacatgatgtcatgtagagatggt
ccagaatggattggtaaggcaatcaaggatatgaagaagagaatatttgacttggtggag
gactcctttgagggggacaattatcctaaagcacttgaatgtctagttgcccttcgcaag
ggttgcatccttgagcaggaaccaaaacatttcaatgattttctacaccatctttgtaaa
ttctgccaaaagaataaccttaattgtttctgtgaatttcttgcatccaaagaactcacc
ctgatctccaagacagaagccatcgacagtgaagttacagatgatgaagctagaaatttt
ctggttaaatcagagccaaaaactgtgtga
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