Quercus lobata (valley oak): 115955464
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Entry
115955464 CDS
T07350
Name
(RefSeq) nuclear pore complex protein NUP133
KO
K14300
nuclear pore complex protein Nup133
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115955464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115955464
03036 Chromosome and associated proteins [BR:
qlo03036
]
115955464
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115955464
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
115955464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
115955464
NCBI-ProteinID:
XP_030929448
UniProt:
A0A7N2MBA2
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Position
8:28489759..28498725
Genome browser
AA seq
1323 aa
AA seq
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MFSPGTKRGNLSSKRERNVVQKSLLPKIESPITPHRRPLIDNSVPDRPSTGTPAPWAPRL
SVFARIPAVNRSDNADAIKPVYVGEFPQVVRDEQASWLQQRVPDDACISGGMEKGTSLAW
IICGNRLFIWSYLSPAASIKCIVLELPSDVSENGNIGSNDRNSWLLCVVNWDSTSRRTKK
VVKHCNSAGIVLCNQKTRVIIYWPDIYSEGRTDPITSFASSDELEVTSSLVDGKATPNRH
KQPIRLGSSLAGSSTLNSLIASAVPNSQHICVAFACGSNGELWQFYCSPTGIHRKKVYDD
ILNLSFQGGDSGQLIESKGYPRSLTWRFSHVSPEESNRQFYLLTDHEIHCFSVNLNPEIH
ISKLWSHEIIGTDGDLGIKKDLAGQKRIWPLDVQVDDHGKVITILVATFCKDRASGSSYT
QYSLLTMQYKSGMSIEPTHERVLEKKAPIQVIIPKARVEDEDFLFSMRLRVGGKPSGSAI
IMSGDGTATVSHYYRNATKLYQFDLPYDAGKVLDASVLPSSDDVEEGAWVVLTEKAGIWA
IPEKAVVLGGVEPPERSLSRKGSSNEGSTQEERRNLTFAADIAPRRASSEAWDAGERQAG
GFTGIARRTGQDEESEALLSHLFHDFLSSGQVDSLLEKLKSSGAFERDGETNVFARMSKS
IVDTLAKHWTTTRGAEILAMAVVSTQLMDKQQKHTKFLQFLALSKCHEELCSRQRYSLQI
ILEHGEKLAGMIQLRELQNVISQNRSIGVGSSHSSAEIQMSGALWDLIQLVGERARRNTV
LLMDRDNAEVFYSKVSDLEDIFYCLDRHLDYVISIEQPLGIQIHRACELSNACVTIIHEA
MHYRNDNHLWYPPPEHLTPWYCQPVVRNGLWSIASYMLQLFNEASGIDMSAKSDLYTHLE
VLTEVLLEAYAGAVTAKVDRGEGHKGLLDEYWNRRDTLLDSLYKQVLDYVEGRHRDLNED
EKKEEILRKLSSRLLSIAKRHECYRAMWRICCDLNDSVLLRNLMHESMGPNGGFSYFVFK
QLYEQRQFSKLLRLGEEFPEELSIFLRQHEELLWLHEVFLNQFSSASEILHTLALSHDES
SISATEVGADRESMHLEPTLADRKHFLNLSKIAARAAPGKNADSETKLKRIEADLKILKL
QEEIIKLLPPDEEKQCVERCLLRPEELIKLCLKGQNAKLSLCAFDVFAWTSSSFRKTHRN
LLEECWKNAADQDDWNGLFQESTAQGWSDEETLQNLRETVLFQASSRCYGLDAETFGEGF
DEVLPLRLENVEPPVFRDSISSVESILMQHKDFPEAGKLMLTSIMLGSVHDDTRLEEGPS
PME
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atgttctctccgggaacaaagagaggcaatttgagctcgaaaagagagcgaaatgtagtg
cagaagagtctgctccctaaaatcgaatctccgatcactcctcaccgccgaccccttatt
gacaattccgttccggatcgcccctccaccggcacccctgctccttgggctcctcgcctt
tccgtcttcgccagaattccagcagtgaacagaagtgataatgcagatgctatcaagcct
gtatatgttggagagttccctcaagtggttcgcgatgaacaggccagttggctgcaacag
cgtgttcctgatgatgcatgtatatctggtggaatggaaaagggaacatctcttgcttgg
attatctgtggaaatagactcttcatttggagttacttatcacctgcagcttcaataaaa
tgcattgttcttgaacttccttcagatgtatcagaaaatggaaacattggcagtaatgac
cggaacagttggttgctttgtgttgtcaattgggatagcacatctaggagaacaaagaaa
gttgttaaacattgcaactctgctggtattgttttgtgtaaccaaaaaactcgagtgatt
atatactggcctgacatctattctgaagggagaactgatcctattaccagttttgcatct
tctgatgaattagaagtgacttcttcacttgttgatggaaaggccaccccaaacaggcac
aaacaacctattaggcttggaagtagtttggctggatcaagtacactgaactctttgatt
gcttctgcagtccctaattcccagcacatctgtgttgcctttgcatgtggttcaaatggt
gagctttggcagttttactgcagtcccactggcattcaccgtaagaaagtatatgacgat
atactgaacttatcctttcaagggggtgatagtggtcaacttatagagagcaaggggtat
ccaaggtcactaacttggcgtttttcacatgtttctcctgaggaatctaatagacagttt
tatctgttgactgatcatgagatacactgtttcagtgttaatctgaatcctgaaatacac
atttcaaagctctggtcccatgaaattattggcacagatggtgatttggggattaagaag
gatctagctggtcagaagcgaatatggcctcttgatgtgcaggtagatgatcacggaaaa
gtgattaccattctggttgccaccttctgtaaggaccgggctagtggttcaagctacaca
caatattctcttctcaccatgcaatataaatctgggatgagtatagagccaacgcatgaa
agagttctagagaaaaaagctcctatccaggtaataatcccaaaagcaagagtagaggat
gaggatttcttgttctccatgagacttcgggtagggggcaagccttcaggatcagcaatc
ataatgtcaggtgatggaacggcaacagtatctcattattatcgaaatgcaacaaagctc
tatcaatttgacctgccttacgacgctggaaaagttttagatgcttcagttcttccttct
tcggatgatgttgaagaaggggcgtgggttgtattgactgagaaagcaggaatatgggca
atacctgaaaaggctgttgtacttggtggagttgaaccacctgaacgaagcttgtcacgt
aaggggagctcaaatgaaggatctacacaagaagaaagaagaaacctcacatttgcggct
gatattgctcctagaagggcaagttctgaagcatgggatgctggagaaagacaagctggg
ggttttactgggattgcacgtcgaactggccaagatgaagaatcagaagctctgttgagt
catcttttccatgattttctatcatctgggcaggttgatagcttgctggaaaagctaaaa
agttctggggcatttgaaagggatggggaaacaaatgtttttgcgcggatgagcaaatca
attgtagacaccttagctaaacactggacaacaaccagaggtgctgagattttggctatg
gctgttgtgtctacccaactcatggataagcagcagaagcatacaaaatttctccagttt
cttgcgttatccaaatgccatgaggagctgtgttctagacagagatattccttgcaaatt
atcttggaacatggtgaaaagctagctgggatgattcaactgagagaactgcaaaatgtg
attagccagaaccgttcaattggagttggctcctcccattctagtgcagaaattcaaatg
tcaggtgctctttgggatcttattcaattagttggggagagagctcgccgaaatactgtt
cttctgatggacagagataatgccgaggtgttctacagtaaggtttctgatcttgaagac
atattttattgcctagacagacatcttgattatgtaataagtatagagcagccgcttggc
attcagatccacagagcttgtgagctctcaaatgcttgcgttactataattcatgaggcc
atgcactacagaaatgataatcacttgtggtatccaccacctgagcacttgacaccatgg
tattgtcaacctgtagtacgtaatgggctttggagcattgcttcctatatgcttcagcta
ttcaatgaagcatctggaattgatatgtctgcaaaatctgatttatatactcatctggaa
gtactgaccgaagttctacttgaggcatatgctggtgctgtcacagccaaggttgaccgt
ggtgaaggacacaaaggtctattagatgagtattggaataggagggatacactccttgat
tccctatataagcaggtcctagattatgtcgaaggcaggcatcgggatctaaatgaagac
gagaaaaaggaagaaatccttcggaagctttcttcacgtttgctgtccattgcaaaacgg
catgaatgctaccgagctatgtggagaatatgctgtgacctcaatgattcagtcctgctt
agaaatcttatgcatgagagcatgggacctaatggaggattcagttactttgtctttaaa
caactgtatgagcagagacagttttctaagcttttaagacttggggaagagttcccagaa
gagctatctatctttttaagacagcatgaggagcttctttggcttcatgaagtgttccta
aatcaattttcgtcagcttcagaaattcttcatacgctagctctctctcatgatgagagc
tctatttcagccactgaagtgggggcagaccgtgaaagtatgcatttagaaccaacattg
gcagacagaaagcactttttaaatctctcaaaaatagctgcaagggcagcaccaggtaag
aatgctgattctgagacaaagttaaagcgcattgaggctgatttgaaaattctgaaattg
caggaagaaataataaaactcctccctcctgacgaagagaagcaatgtgttgaaaggtgt
ctcctccgtccagaagagcttattaagctgtgcctcaaaggtcaaaatgcaaagctctcc
ttgtgtgccttcgatgtgtttgcatggaccagctcctcttttcgtaagacccacagaaat
cttttggaggagtgctggaagaatgctgccgatcaggatgattggaatggactctttcaa
gaatctacagctcaagggtggagtgacgaggaaacgttgcagaatctgagggaaactgtg
ctcttccaggcttccagtagatgttatggactcgatgcagaaacttttggagagggcttt
gatgaagttttgccacttagactagaaaatgtggagcctccagtttttagggattcaatt
tcttcagtggagtcaatactgatgcagcataaggatttcccagaggcaggcaaactaatg
ctgacttctatcatgttggggagtgttcatgatgataccagactagaagagggtccttcc
ccgatggaataa
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