Quercus lobata (valley oak): 115955508
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Entry
115955508 CDS
T07350
Name
(RefSeq) ruvB-like protein 1 isoform X1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115955508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
qlo03036
]
115955508
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
qlo03037
]
115955508
Enzymes [BR:
qlo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
115955508
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
115955508
Chromatin remodeling factors
SRCAP complex
115955508
INO80 complex
115955508
INO80 complex (yeast)
115955508
SWR1 complex
115955508
ASTRA complex
115955508
Cilium and associated proteins [BR:
qlo03037
]
Motile cilia and associated proteins
Dynein assembly factors
115955508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_22
AAA_16
AAA_5
AAA_18
AAA_19
Mg_chelatase
AAA_25
bpMoxR
DnaB_C
Cdc6_lid
TsaE
AAA_28
IstB_IS21
AAA_11
nSTAND3
NPHP3_N
ResIII
AAA_7
Zeta_toxin
NACHT
DUF5887
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
115955508
NCBI-ProteinID:
XP_030929498
UniProt:
A0A7N2M6Z6
LinkDB
All DBs
Position
8:complement(275726..288035)
Genome browser
AA seq
458 aa
AA seq
DB search
MDKVRIEEVQSTTKKQRIATHTHIKGLGLEASGRALPLAAGFVGQAEAREASGLVVDMIR
QKKMAGRALLLAGPPGTGKTALALGIAQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFR
RAIGLRIKENKEVYEGEVTELSPEEAESVTGGYGKSISHVIIGLKTVKGTKQLKLDPTIY
DALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEIVQD
VTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYIDEGVAELVPG
VLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGFCNVRGTDMNCPHGIPVDLLDRL
VIIRTQTYDVADMIKILALRANVEDLVIDDESLAYLGDIGLQASLRHAVQLLSPSSIMAK
MNGRDNICKADIEEVKALYMDAKSSARLLQAQQEKYIS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggataaagtgaggatagaagaggtccagtccactacaaagaagcagcgcatcgctact
cacactcacatcaaaggtcttggccttgaggccagtggaagagcattgcccttggctgct
gggtttgtgggtcaggcagaggcaagggaagcatctggtcttgtagttgatatgatacgg
cagaagaaaatggctgggcgggcacttctactggctgggcctcctggtacaggaaagaca
gctctggctcttggaatagcacaggaacttgggagcaaggttccattctgcccaatggtt
gggtcagaagtgtactcatcagaagtaaagaaaactgaggttttgatggaaaactttcga
cgggccattggtctacgtatcaaggaaaataaagaagtctatgaaggagaggttactgaa
ctttccccggaagaagctgagagtgtgacaggtggctatggtaaaagtattagccatgtg
atcattggattaaaaactgtgaaaggaaccaagcaactgaagttggacccaaccatttat
gatgccttgatcaaggagaaggtggctgttggtgatgttatatatattgaagcaaatagc
ggagcagtaaagagggtgggcagaagtgacgctttcgctacagaatttgaccttgaagca
gaagagtatgttccacttcctaaaggagaggttcacaaaaagaaggagatagttcaggat
gtaacactacatgatctggatgctgcaaatgcacggcctcaaggtgggcaagatatactg
tccctaatggggcagatgatgaagcctaggaaaacagaaatcactgacaagttaagacaa
gaaattaataaggttgttaaccggtacattgatgaaggtgtagcagaacttgtccctgga
gttctattcattgatgaggtacatatgctggatatggaatgcttttcatacttgaatcgt
gctttagagagctcactgtctccaatagtaatctttgccacaaacagagggttttgcaat
gtgagagggactgatatgaactgtcctcatggcatacctgtcgacttgttggaccggttg
gttattatccgaacacagacttatgatgttgctgacatgataaagattttggctctccgt
gcaaatgtggaggacctagtaatagatgatgaaagtttggcttacctgggtgacattggt
ctacaagcatccttaaggcatgcagttcagctgttatcgccctccagtattatggcaaaa
atgaatggccgcgacaatatctgcaaggcggatattgaggaagtgaaagctctctatatg
gatgcaaagtcttcagcaagacttcttcaagcgcagcaggaaaaatacatttcatga
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