Quercus lobata (valley oak): 115955588
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Entry
115955588 CDS
T07350
Name
(RefSeq) serine/arginine-rich splicing factor RS41-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115955588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qlo03041
]
115955588
Spliceosome [BR:
qlo03041
]
Common components
Common spliceosomal components
SR proteins
115955588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNA_bind
Nup35_RRM_2
RRM_5
RRM_Nup35
DUF2129
Motif
Other DBs
NCBI-GeneID:
115955588
NCBI-ProteinID:
XP_030929628
LinkDB
All DBs
Position
8:complement(50585086..50589844)
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AA seq
260 aa
AA seq
DB search
MRPIFCGNVEFDARQSDIERLFRRYGRVERVDMKSGFAFVYMEDERDAEYAIRRLDRTEF
GRKGRRLRVEWTKHERGIRRPGGSRSSANVKPSKTLFVINFDPSYTRTRDLERHFDPHGK
ILNIRIRRNFAFIQYETQEDATRALEATNMSKFMDRVISVEYAVRDDDDERRNGYSPDRR
GRDMSPHRRSYDHGRSPSPYRRDRASPDYGHGPNLSSRSELRGSPKYDRGAESPVNGRYD
SRSPPPRERSSPPARERSRS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccatcttttgtggtaacgttgaatttgatgcccggcagtctgatattgagcga
cttttcagaagatatgggagggttgagagggtggatatgaagtctggatttgctttcgtc
tatatggaagatgaacgagatgctgagtacgcaattagaaggcttgacaggacagaattt
ggtcgaaagggtcgccgacttcgtgttgagtggaccaagcatgaacgtggcattagaagg
cctggcggttcaagatcttcagctaatgtgaaaccatcaaaaaccttgtttgtcattaat
tttgatccaagctataccagaacaagggatttggagaggcactttgatccacatgggaaa
atattgaacataaggatcagaaggaattttgcatttattcagtatgagacacaggaggat
gctaccagagcattggaagcaacgaacatgagtaagttcatggatcgagtcatttcagtg
gaatatgcagttcgggatgatgacgatgagaggagaaatgggtacagtcctgatagaaga
ggccgggacatgtctccccatagaagaagctatgatcatgggcgatccccaagtccatat
cgtagagatagggcaagcccagactatggccatggaccaaatctaagctccagatctgaa
ctaagaggaagtcccaaatatgatagaggagctgaaagcccagtcaatgggagatatgac
agccgatcaccaccaccaagggaaagatcatcaccaccggcaagggaaagatctcgatct
taa
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integrated database retrieval system
