Quercus lobata (valley oak): 115955595
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Entry
115955595 CDS
T07350
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03040
Spliceosome
qlo04141
Protein processing in endoplasmic reticulum
qlo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115955595
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115955595
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115955595
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
qlo01009
]
115955595
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qlo03041
]
115955595
03009 Ribosome biogenesis [BR:
qlo03009
]
115955595
03110 Chaperones and folding catalysts [BR:
qlo03110
]
115955595
04131 Membrane trafficking [BR:
qlo04131
]
115955595
03051 Proteasome [BR:
qlo03051
]
115955595
03029 Mitochondrial biogenesis [BR:
qlo03029
]
115955595
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
qlo04147
]
115955595
Protein phosphatases and associated proteins [BR:
qlo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
115955595
Spliceosome [BR:
qlo03041
]
Complex B
Other components
Prp19 complex
115955595
Complex C
Prp19-CDC5 complex
115955595
Ribosome biogenesis [BR:
qlo03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
115955595
Chaperones and folding catalysts [BR:
qlo03110
]
Heat shock proteins
HSP70 / DNAK
115955595
Membrane trafficking [BR:
qlo04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
115955595
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
115955595
Proteasome [BR:
qlo03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
115955595
Mitochondrial biogenesis [BR:
qlo03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
115955595
Exosome [BR:
qlo04147
]
Exosomal proteins
Proteins found in most exosomes
115955595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
115955595
NCBI-ProteinID:
XP_030929642
UniProt:
A0A7N2MEQ1
LinkDB
All DBs
Position
8:59160317..59163442
Genome browser
AA seq
649 aa
AA seq
DB search
MSGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN
QVAMNPTNTVFDAKRLIGRRYSDASVQNDMKLWPFKIIAGPGDKPMIVVNYKAEEKQFSA
EEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEP
TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKSTAGDTHLGGEDFD
NRMVNHFVQEFKRKNKKDISGSPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY
STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFF
NGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI
PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQI
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKK
KVEAKNALENYAYNMRNTIKDEKIGSKLSPEDKKKIEDAIDQAIQWLDGNQLAEADEFED
KMKELESLCNPIIAKMYQGAGPDMGGGGMDEDAPPAGASGAGPKIEEVD
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtaaaggagagggacccgccatcggaatcgatctcggcacgacctactcgtgc
gtcggagtttggcagcacgaccgtgtcgagatcatagctaacgaccaagggaaccgaacg
acgccgtcttatgtcgctttcaccgatacggagcgtttgatcggtgacgctgctaagaac
caggtcgccatgaaccccaccaacaccgtcttcgatgctaagcgtctgattggtaggaga
tacagcgatgcgtcggtccagaatgacatgaagctttggcctttcaagatcattgctggg
cctggtgataaacccatgattgtggtcaactacaaagctgaggagaagcagttttctgct
gaggaaatctcttccatggtcctcattaagatgcgcgagattgccgaggcctaccttggt
gccacgataaagaatgctgttgtgactgtaccggcttacttcaacgactctcagcgccag
gccacaaaggatgccggagtcattgccggtctcaatgtgatgcgtatcatcaatgagccc
actgctgcagccattgcttatggtcttgacaagaaggcgaccagcgtcggcgagaagaat
gttttgattttcgatcttggtggtggtacttttgatgtctctcttcttaccattgaagag
ggtatctttgaagtgaagtcaacagctggtgacactcaccttggaggtgaggattttgat
aatagaatggtgaatcattttgttcaggaatttaagaggaagaacaagaaggacattagt
ggaagccccagagctcttaggagattgaggactgcttgtgaaagggcaaagaggactctt
tcatcgactgctcagaccaccattgagattgattctttgtatgagggtattgatttctat
tcgacaattactcgtgctaggtttgaggaactcaacatggatctctttaggaagtgcatg
gaaccagttgagaagtgtttgagggatgctaagatggacaagagcaccgtacatgatgtt
gtccttgttgggggttccactagaattcccaaggttcagcagctattgcaggacttcttc
aatgggaaggaactttgcaagagcattaaccccgacgaggctgttgcctatggtgccgct
gttcaggccgccatcttgagcggtgagggcaacgagaaagtgcaggatctcctgctcttg
gatgttactcctctgtcccttggtttggaaactgctggaggtgttatgactgtattgatt
ccaaggaataccacaattcccaccaagaaggagcaggtgttctcgacctactcagacaac
caaccaggtgtcttaatccaggtctacgaaggtgagagagcaagaaccaaggacaacaac
ttgctcggaaaattcgagctctctggcattcctccagcacccaggggtgttcctcagatt
accgtctgctttgatatcgatgctaatggtatcttgaatgtctccgctgaggacaagacc
acaggccagaagaacaagatcacaatcacaaatgacaagggaaggttgtccaaggaagaa
attgaaaagatggttcaggaggctgagaagtacaagtcagaggacgaggagcacaagaag
aaggttgaagccaagaatgcattggagaactatgcctacaacatgaggaacaccatcaag
gacgagaagattggttccaagctttcacctgaggacaagaagaagattgaggacgccatt
gatcaggcaatccagtggttggacggtaaccagcttgcagaggctgacgagttcgaggac
aagatgaaggagctcgaaagcttatgcaaccctatcattgccaagatgtaccagggtgct
ggccctgacatgggtggtggcggcatggacgaggatgctcctcctgctggtgccagtggt
gctggtcctaagatcgaagaagttgattaa
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