Quercus lobata (valley oak): 115955615
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Entry
115955615 CDS
T07350
Name
(RefSeq) chaperonin 60 subunit beta 2, chloroplastic isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115955615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115955615
03110 Chaperones and folding catalysts [BR:
qlo03110
]
115955615
03029 Mitochondrial biogenesis [BR:
qlo03029
]
115955615
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
qlo04147
]
115955615
Enzymes [BR:
qlo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
115955615
Messenger RNA biogenesis [BR:
qlo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
115955615
Chaperones and folding catalysts [BR:
qlo03110
]
Heat shock proteins
HSP60 / Chaperonin
115955615
Mitochondrial biogenesis [BR:
qlo03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
115955615
Exosome [BR:
qlo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115955615
Exosomal proteins of other body fluids (saliva and urine)
115955615
Exosomal proteins of breast cancer cells
115955615
Exosomal proteins of colorectal cancer cells
115955615
Exosomal proteins of bladder cancer cells
115955615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Transposase_24
Motif
Other DBs
NCBI-GeneID:
115955615
NCBI-ProteinID:
XP_030929671
UniProt:
A0A7N2M642
LinkDB
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Position
8:complement(9875951..9883931)
Genome browser
AA seq
608 aa
AA seq
DB search
MASTFTAMSSVGSLAAPGCRVMDKKFASSSDKLSSSASISSFSFARRQNVMSQRNRSPKI
CAMAKELHFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA
KEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT
RGIEKTTKALVSELKLMSKEVEDSELADVATVSAGNNYEVGNMIAEAMSKVGRKGVVTLE
EGKSAENSLYVVEGMQFDRGYISPYFVTDSEKMAVEYDNCKLLLVDKKITNARDLINVLE
DAIRGGYPIVLIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGG
TVIREEVGLTLDKAEKEVLGHASKVVLTKDTATIVGDGSTQEAVNKRVAQIRNLIEAAEQ
DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT
LLRLASKVDAIRDSLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNFK
YGYNAATGKYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEQVPAGNP
MDNSGYGY
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaacttttacagccatgtcttcagttggctccttggctgctccaggttgccgt
gttatggacaagaaatttgcttcttcttcagacaagttatcatcttctgcttccatttct
tcgttctcatttgctaggagacaaaatgtgatgtcacaaagaaatcgctctcccaagatt
tgtgccatggcaaaggaattgcatttcaacaaggacggctcagctattaagaagcttcaa
actggtgtgaacaagcttgcggatttagttggggttactcttggtccaaaaggacggaat
gttgttctggaaagcaagtatggctccccaaaaattgttaacgatggtgttactgtggct
aaagaggttgagttggaggacccagttgagaacattggtgctaagttagtgaggcaagcg
gctgcaaagactaatgatttggctggtgatggaacaacaacgtctgttgttctcgcacaa
ggtcttattgctgagggtgtcaaggtggtagctgctggtgcaaaccctgttttaattact
cgaggcattgagaagaccacaaaagctcttgtgtctgagcttaagttgatgtcaaaggag
gttgaagacagcgagctggctgatgtagcaacagttagtgccggaaacaactatgaagta
ggaaatatgatagctgaagccatgagtaaggtgggtcgtaagggtgtggtgaccctagaa
gagggaaaaagtgctgagaacagcctttatgttgttgaaggaatgcaatttgatcgtggt
tacatttcaccttactttgtcacagatagtgagaaaatggcagttgaatatgataattgc
aagttgcttcttgttgataagaaaataacaaatgcaagggatcttattaacgtgcttgag
gatgctatcagaggtggatacccaattgtgttaattgcagaagacattgaacaagaagct
ctagcaactttggttgtgaacaagctgaggggtgctctgaagattgctgcactgaaagct
cctggttttggagagcgcaagagccagtaccttgatgacattgctattctcactggagga
actgtaatcagggaagaggtggggcttacgttagacaaagctgagaaggaggtacttggc
catgcttctaaggtggtgcttaccaaggatactgctacaattgtcggtgatggaagcaca
caggaagcagtaaacaagagagttgcgcagattagaaatcttattgaggctgcagagcaa
gattacgagaaggaaaaactgaatgaaaggattgcaaaattgtcaggtggagttgctgtg
atccaggttggtgcacaaactgagacagagctcaaagaaaagaaactgagagtcgaagat
gctcttaatgcaacaaaggctgctgttgaggaaggtattgtagtcggcggtggatgcacc
ctgctcagacttgcatcaaaggtggatgctatcagggacagccttgacaatgatgaagaa
aaggttggagcagatattgtcaaaagagctttgagttaccctttgaaattgattgccaag
aatgctggtgttaatggaagcgtggttagcgagaaggtgctttccagtgacaattttaaa
tatggatataatgcggccacaggaaaatatgaagatttaatggctgccggaattattgat
ccaactaaggtggttagatgttgccttgagcatgcttcctcagtggcaaaaacattcttg
atgtcagattgtgtagttgttgaaatcaaggagcctgaacaagtgcctgctggcaacccc
atggacaactcaggatatggctactga
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