Quercus lobata (valley oak): 115955657
Help
Entry
115955657 CDS
T07350
Name
(RefSeq) vacuolar protein-sorting-associated protein 33 homolog isoform X1
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
115955657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qlo04131
]
115955657
Membrane trafficking [BR:
qlo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
115955657
Hops complex
115955657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
DUF2067
Nop5_56-rel_N_Arc
Motif
Other DBs
NCBI-GeneID:
115955657
NCBI-ProteinID:
XP_030929739
LinkDB
All DBs
Position
8:54607518..54618315
Genome browser
AA seq
595 aa
AA seq
DB search
MAQIPNLDNAPLNLTSLREQSQKELLNILKNIRGKKCLVIDPKLGSSLSSIIQTSLLKEH
GVELRHLSADPLQTDCIKVVFLVRSQLDLMKFICLNVQDDVSKGFQREYFVYFVPRRTVV
CEKILEEENVYNLMTIGEYPLYIVPLDEDVLSFELDLAYKESQVDGDTSSLWHIAKAIHK
LEFSFGVIPNVRAKGKASVRVADILNRMQAEEPVNSPDMVVPEINTLILLDREVDMVTPM
LSQLTYEGLLDECLHVNNGSVELDASIMGLQQEGKKIKVPLNSSDKLFKEIRDLNFEVVV
QILRQKATSMKQDYTEVTTTTQSVSELKDFVKKLNSLPEMTRHINLAQHLSTFTSKPAFL
GQLDMEHTIVEAQSYDICFEYIEELIHKQEPLVNVLRLLILFSITSSGLPKKQFDYLRRE
LLHSYGFEHMATLNNLEKAGLLRKQESKSNWLTIKRALQLVVEDTDTANPNDIAYVFSGY
APLSIRLVQHAVRSGWRPIEEILKLLPGPHSETKRGRFSSSPSYDTLQASANIDKVADGR
RSLVLVVFIGGITFAEISALRFLSAQEGMAYDLIVGTTKIVSGHSLAETFVERLG
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggctcagattccgaacctagataatgctcctctcaatctcacatctctaagagaacag
tcacagaaggagctcctaaacatcctcaagaatattcgagggaagaagtgcttggttatt
gatccgaagctcgggagttctctctcatcgatcatacaaacatcgcttcttaaggaacat
ggggttgagttgcggcatctttcagctgacccccttcaaactgactgcatcaaagtggtt
ttccttgtccgttctcagcttgatttaatgaaattcatatgtttgaatgttcaagatgat
gtatcgaagggatttcaaagggaatactttgtttattttgtccctcgccgcacagttgta
tgtgagaagatccttgaagaggaaaatgtttataatttgatgactataggggagtaccca
ttgtacatagttccattggacgaggatgttttatcatttgaactcgaccttgcttataaa
gaaagccaagtcgatggtgatacaagctcactttggcatatcgctaaagccattcacaag
cttgagttttcttttggagtgataccaaacgtgagagccaaaggcaaagcatcagtgcgt
gttgcagacattctaaaccgtatgcaagcagaggaacctgttaactcacctgatatggtt
gtgccagagataaatacactcatccttttagatagggaggtggacatggttactcctatg
ttgtctcaattaacgtatgaggggctacttgatgagtgtctgcatgtcaataatggttct
gtggagctggatgcatctatcatgggtctccaacaagagggaaaaaagataaaagttcca
cttaattcaagtgacaagctgtttaaggagatacgggatctcaacttcgaagttgttgtc
cagattctacgtcagaaagcaacatccatgaagcaggactacacagaagtgacaacaact
acacagtcagtttctgaattaaaggactttgtcaaaaagctgaactcattgccagaaatg
actaggcacataaatcttgctcagcatctgtcaacattcacatcaaagccagcctttctt
gggcaacttgacatggaacacacaattgttgaggcacagagttatgacatatgctttgag
tacattgaagaattgatccataagcaggagcctcttgtcaatgtcctacgccttctcatc
ttattttccattacaagttctgggttgcccaaaaagcagtttgactatttgaggagagaa
ctactccacagctatggatttgagcacatggcgacactgaataatttagaaaaagctggg
ttgctcagaaagcaggagtcaaaaagcaactggctgacaattaaacgtgctctacaactt
gttgttgaggacactgatacagccaacccgaatgatattgcctacgtattttctggatat
gcacctcttagtattcgtcttgttcagcatgctgtgcggtctggatggcgtcctatagaa
gaaatcctgaagctgctaccaggaccacattcagaaacaaaaaggggcagattctcaagc
agtccatcatatgacaccttgcaggcttcagctaatatagacaaagttgctgatggaagg
cggtctctagttctcgttgtcttcattggaggcataacatttgcagagatttccgctctt
cgatttctcagtgctcaggaagggatggcatatgatttgattgttgggacaaccaaaatt
gtcagtgggcatagcttagctgaaacatttgtagagaggttgggctaa
DBGET
integrated database retrieval system
