Quercus lobata (valley oak): 115955749
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Entry
115955749 CDS
T07350
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115955749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115955749
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
115955749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
115955749
NCBI-ProteinID:
XP_030929918
LinkDB
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Position
8:complement(5941596..5946100)
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AA seq
478 aa
AA seq
DB search
MESDLGKLFIGGISWDTDEERLKDYFRKYGEVVEAVIMRDRATGRARGFGFVVFADPAVA
ERVIMDKHIIDGRTVEAKKAVPKDDQHILNRTPGSVHGSPGPGRTKKIFVGGLASTVTES
DFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDRVLLKQFHELNGKMVEVKR
AVPKELSPGSSRSPIVGYNYNLSRANSFLNNYVQGYNMSPVGGYGVRMDGRFNQVASGRS
GFSPFGTTGYGMSLNLEPGLSPSYGGNSNFGNSLGYARMLSPYYSGNSNRYSTPIGYSGG
NGRNDSLLSSTTRNVWGNGGLNNAVNSSSPGAYLNSGSGGFGVFGNSSANWGPSPGSTQG
GGSPPGYTSGNIGYGSGDNSFGLGAGGGYGRNSGTGLAQSSSFAASSGSYEGSYGDLYRS
GSVYGDSTWRSTTPELDGSGSFGYALGNMSSDVTAKSSEGYIGSYNVTSRQANRGIAT
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggaatcagatcttggaaagctcttcattggtgggatttcttgggacacagatgaagaa
agacttaaggactattttaggaaatatggggaggtggtggaagcagtgatcatgagagat
cgtgccactggtcgtgctcgtggctttggtttcgttgtgtttgcagatcctgctgttgca
gaaagagtcatcatggacaagcacataattgatggccgcacagttgaggcaaagaaggct
gtacctaaggatgatcagcacattttaaatagaacccctggtagtgttcatggttctcca
ggccctggacgtaccaaaaagatttttgtgggaggtttagcatccacagtcactgagagc
gactttaagaaatactttgatcagtttggtacaattaccgatgttgtagtgatgtatgat
cacaacacccaaaggccaagaggctttggcttcatcacctatgattctgaggatgcagtg
gatagagtgctcctcaaacagtttcatgaattgaatggtaaaatggttgaggtcaagagg
gcagtcccaaaagaactatccccaggttccagtcggagccctattgtaggatataactat
aatttgagtagggccaatagcttccttaacaattatgttcagggttataatatgagccca
gttggaggttatggagtcaggatggatggtaggtttaatcaggttgctagtggtcgtagt
gggttttccccatttggtacaactggttatggaatgagtctgaatttggagccagggttg
agcccaagctatggtggcaattccaactttggcaatagtcttggctatgcacggatgctg
agtccttattatagtggaaattcaaacaggtatagcactcctattgggtatagtgggggt
aatggaagaaatgattctctactaagctccaccactcgaaatgtctggggaaatgggggc
cttaacaatgctgtgaactcttcaagccctggtgcttacttgaactctggaagtgggggt
tttggagtttttggaaatagtagtgcgaattggggcccttctcctggttcaactcaaggt
ggagggagtcctcctggttatactagtgggaatattggttatggcagtggagacaacagc
tttgggttgggagctgggggagggtatggaagaaacagtggcacaggtttagcccaatct
tcatcattcgctgcatcaagtggaagctatgagggatcctacggtgacttgtatcgtagt
ggttctgtttatggcgattcaacttggcgatctactactcctgagctagatggttctggc
tcatttggttatgcgcttggcaatatgtcttcagatgtcacagccaaaagttctgagggc
tatattggaagttacaacgttacaagtagacaagcaaatagaggaattgctacatag
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