Quercus lobata (valley oak): 115955789
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Entry
115955789 CDS
T07350
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 14
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
qlo01002
]
115955789
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qlo04121
]
115955789
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
qlo04147
]
115955789
Enzymes [BR:
qlo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115955789
Peptidases and inhibitors [BR:
qlo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
115955789
Ubiquitin system [BR:
qlo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
115955789
Exosome [BR:
qlo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115955789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UBA_DHX29
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
115955789
NCBI-ProteinID:
XP_030929987
LinkDB
All DBs
Position
8:17207102..17229074
Genome browser
AA seq
813 aa
AA seq
DB search
MSDPMDLIRSNLSRVRIPEPTNRIYKQECCLSFDTPRSEGGLFIDMNTFLAFGKDCVAWN
YEKTGNKVYLHIKQTKKVVAEDRPLKKPTLLGIGIDGGFDNSELEYEETYTIVILPDHVT
LPFPSVELPEKVRLAVDAILMAEGAERKEQVAAWIADKKQTSAYAMDLQQIENGVIVPPS
GWKCIKCDKTDNLWLNLTDGMILCGRKNWDGTGGNNHAIDHYNETHYPLAVKLGTITADL
EAADVFSYPEDESVLDPLLAQHLAHFGIDFSSLQKTEMTTAERELDQNTNFDWNRIQESG
QDVEPICGPGYTGLVNLGNSCYLAATMQVVFSTHSFYSRYHRNQSLKVAFEMAPADPTVD
LNMQLTKLAHGLLSGKYSIPDLEKDDNANATSTARAKQQGIPPRMFKAVIAASHPEFSTM
RQQDALEFFLHFLDQVERANAGKPELDPAKSFKFGVEDRILCSSGKVTYNSRLDYILSLN
IPLHEATNKQELEEFHKFKAEKISEGKEVSSDEIVRPRVPLEACLANFSAPEEIHDFYST
ALKAKTTAIKTTGLTSFPDYLVLHMRKFVMEAGWVPKKLDVYIDVPDIIDISHIRSNGLQ
PGEELLPEGVPGDEVESNKPLPNEDIVSQLVSMGFNHHHCEKAAIRTSNAGVEEAMNWLL
SHMEDPDIDVPISQEAQGADTLSSVDQSKVDTLISFGFQEEIARKALKASGGDIEKATDW
IFSNPEASVSSDMDATTSNTTPTPIDAGLPDGGGRYRLIGIVSHIGTSTQCGHYVAHIFK
DGRWVIFNDDKVGASVNPPKDMGYLYFFERLNS
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacccgatggacttaatccgatccaatctctcccgggttcggatcccggagccc
accaatcgcatctacaagcaagaatgctgcctctctttcgacactccgagatcagaaggt
gggttgtttatcgacatgaatacatttctagcttttggaaaggactgcgtggcttggaac
tatgagaagactgggaataaagtttacttgcatataaagcaaacaaaaaaagtggttgct
gaagataggcctttgaagaaaccaacacttttgggtataggtattgatgggggatttgac
aacagtgaacttgaatatgaagaaacttacactatagttatattgcctgaccatgttact
cttccatttccttcggtggagttgccggagaaggtcaggttggccgtcgatgctattttg
atggctgagggtgctgagcggaaagagcaagttgcagcttggatagccgataagaaacaa
acaagtgcatatgcaatggatttgcaacagattgaaaatggtgttattgtccctccatct
gggtggaaatgtattaagtgtgataaaacggacaatctttggctaaatcttactgatggc
atgatcctttgtgggaggaaaaattgggatggaactggtggcaacaaccatgctattgat
cactacaatgagacacactaccctcttgctgtaaagcttgggaccattacagctgatctg
gaagcagcagatgttttctcttatccggaggatgaaagtgttctggacccgctattagca
cagcatctggcacattttggcattgatttttcatcattacagaagactgaaatgacaact
gctgagagagaacttgaccagaatacgaactttgattggaaccgtatccaagaaagtgga
caggatgtggaaccaatttgtggaccaggttatactggacttgtcaatcttggaaacagc
tgctatttggcagcaaccatgcaagttgtgttttcaacacattccttctattcacgatac
catagaaaccaaagtttgaaagtggcttttgagatggctcctgctgatccaactgtagac
ctcaatatgcagttgactaagttggcccatggtttgctatctggaaaatactctattcca
gatctggagaaagatgataatgcaaatgctacctcaactgcaagagctaaacagcaaggg
ataccccctcgaatgttcaaagcagttattgccgccagccatcctgagttctctacaatg
agacaacaggatgccctggaattcttcctacattttcttgaccaagttgaacgagctaat
gcgggcaaacctgaattggatcctgcaaagagtttcaagtttggtgttgaagatcgaatc
ttatgttcatctggaaaagttacttacaatagtaggcttgactacattctttctttaaat
atcccactgcatgaggcaactaataaacaagaactagaagaatttcacaaattcaaagca
gaaaaaatttcagaagggaaggaagtatccagtgatgaaattgtacgtccacgggtgcca
ttagaagcatgccttgcaaacttttctgctccagaggagatacatgacttttacagcact
gctttgaaggctaagacaacagcaatcaagactacaggcctaacttcattccctgattac
ctggtgttgcacatgcgtaaatttgtcatggaagcaggctgggtaccaaaaaagcttgat
gtctatatagatgttcctgacatcatagatattagtcacatacgcagcaatggtcttcaa
cctggggaggagctattaccagagggtgttcctggggatgaggtagaatcaaataagccc
ttgccaaatgaagatattgtttcccagcttgtctcaatgggattcaaccatcatcattgt
gagaaagctgcaataaggacctcaaatgctggcgtggaagaggcaatgaattggttactt
tcacacatggaagatccagatattgatgttccaatttcccaagaggcacaaggtgctgac
actttgtcaagtgttgaccaatcaaaagttgacactttaatttcatttggttttcaagaa
gaaattgctaggaaagcactgaaggcctcgggtggtgacattgagaaagcaacagattgg
atttttagcaatcctgaagcttctgtttcatctgatatggatgctaccacatcaaacact
acacctactcctatcgatgctgggcttcctgatggaggaggaagatacagactgatagga
atagtaagccacattggaacctcgactcaatgtggtcactatgtcgctcacatctttaaa
gatggtagatgggttattttcaatgatgacaaggtcggggcatccgttaatcctcccaaa
gacatgggatatttatatttctttgaaaggcttaacagttaa
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