Quercus lobata (valley oak): 115955843
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Entry
115955843 CDS
T07350
Name
(RefSeq) transcription elongation factor TFIIS
KO
K03145
transcription elongation factor S-II
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qlo03021
]
115955843
Transcription machinery [BR:
qlo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
115955843
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
Baculo_LEF5_C
Motif
Other DBs
NCBI-GeneID:
115955843
NCBI-ProteinID:
XP_030930073
UniProt:
A0A7N2R9Z5
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Position
8:65055977..65061869
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AA seq
386 aa
AA seq
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MEKELVEFFEAAKKAADAAASESADGGAEESRCLDALQQLKNFPVTYQLLVSTQVGKRLR
HLTKHPRKKIQSFASELMEIWKDIVIKETNRNRKNESLDVKDSVKVESVSAGTPKAEKDQ
KPFSVKVEKVSKAESIKVEKIDRNGTPSLEKVSMSVGVKRERKVSVDVVRIEKTDSAEKV
KFEQRIKEEKQASGVKKQSLVHGAPPKLTSMVKSNDSVRDKVRESLYQAFSKVSNEADND
VKDEVNACDPIRVAVSIESLLFEKWGGSLGAQKAKYRSLMFNLRDGNNPDFRRRVLLGHI
KPERLINMNTAEMASDKRQNENKKIEEKALFDCERGGQPKATTDQFKCGRCGQRKCTYYQ
MQTRSADEPMTTYVTCVNCNNHWKFC
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagaactggtggaatttttcgaagcggcgaaaaaagcagcggacgcagctgca
tccgaatcggcggacggaggagccgaggaaagtcggtgccttgatgccttgcagcagctc
aagaattttcctgtcacttatcaacttcttgtctccacccaggttgggaagcgtcttcga
catctcacaaagcatcctaggaagaaaatccaatcatttgcttctgaactgatggagata
tggaaggatatagttataaaggaaacaaacagaaacagaaaaaatgaaagcttggatgtt
aaggattctgtcaaagttgagtctgtaagtgcagggactcccaaggctgagaaggatcag
aagcccttttctgtgaaggttgagaaagtttcgaaggctgaaagcatcaaggtcgagaaa
attgatcgaaatggtacaccaagcttggagaaagtttcaatgtcagttggtgtcaaaaga
gagagaaaggttagtgtagatgttgtcaggattgagaaaactgattcagctgaaaaagtt
aagtttgaacagagaattaaagaagaaaagcaagcttctggagtgaagaaacagtcacta
gtccatggtgctcccccaaagctgacatcaatggttaaatctaatgattccgttcgggac
aaagtacgagaaagtctttaccaagctttctctaaagtttctaatgaggctgataatgat
gttaaggatgaagtgaatgcatgcgatcctattagggttgctgtttctatagagtctctt
ctgtttgagaagtggggaggttctctaggggctcaaaaggccaagtatagatccttaatg
ttcaatcttagggatggtaacaacccagattttcggagaagggtacttcttggacatatc
aaaccagagaggcttatcaacatgaacacagcagaaatggcaagtgataagaggcaaaat
gagaataaaaagattgaagagaaagcattatttgactgtgagcgtggagggcaacccaaa
gcaacaactgatcaatttaagtgtggtagatgtgggcaacgcaaatgcacctactaccaa
atgcagacacggagtgctgatgaacctatgacaacatatgtaacatgtgtaaactgcaat
aaccattggaaattctgttaa
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