Quercus lobata (valley oak): 115955911
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Entry
115955911 CDS
T07350
Name
(RefSeq) flap endonuclease GEN-like 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qlo03400
]
115955911
DNA repair and recombination proteins [BR:
qlo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
115955911
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
RtcR
Motif
Other DBs
NCBI-GeneID:
115955911
NCBI-ProteinID:
XP_030930168
UniProt:
A0A7N2ME97
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Position
8:complement(50694474..50702184)
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AA seq
613 aa
AA seq
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MGVGGLWDLLKPYARLEGPDFLVNKRVAVDLSFWIVQHETAIKARVRNPHLRLIFFRTIN
LFSKFGAFPVFVTDGTPSPLKSRARIARFFHASGIDLSDLPVAEEGVSIERNTAFSKCVQ
ECVELLELFGMPVLKAKGEAEALCAQLDSEGYVDACVTADSDAFLFGAKCVIKFVRPNSK
EPFECYHMSDIEAGLGLKRKHLIAISLLVGNDHDLNGVQGIGLDTALRFVQAFSEDEILN
RLHEIGSGDSPIFQGAIKSLDDCVPVSSESSLKIKYSHCSLCGHPGSKRAHFKSSCEYCS
TSNGEGCMKKPEGFKCDCSSCDMDRREKEQKKQENWRIKVCNKIAMESNFPNDEIIKMYL
CSNHGDFTEEVGPCISWGSPNTEMLVDFLAFHQHWEPSYIRRMMLPMLSTVFLREMAINP
VKTLLYGQYEFDSIQRLKIRYGHQFYVVKWKKTVPALGSIMNSILSEESDMQQDVVDVDE
SLDLGDESEGPRIHVEEGSCYLLTDENMDIVRAAFPEEVDRFLHEKELKESKRKKSSSLR
SEGTNEKSELKSSRGVQLSITEFYRSTKVQIQLKPGEDLPRVSDSQGDGTSKEKRKVSNP
NLSKSVRRRLLFK
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgggggttggaggtttatgggacttgcttaaaccctatgcccgactcgaaggcccagat
ttcctggttaacaaacgggtcgccgtggacctctccttctggatcgtccagcacgaaacc
gctatcaaagcccgtgtcaggaacccacacctgaggctcattttcttccgtaccatcaat
cttttctccaagtttggagcatttccggtctttgtcactgatggaactccatcaccactg
aaatcgcgggcaaggattgcaagattctttcatgcttctggcattgatttgtcagatttg
cctgtggctgaagagggtgtttcaattgagaggaatacagcattttcaaagtgtgttcaa
gagtgtgtggaactgcttgagctatttggtatgcctgtattaaaagcaaaaggagaggct
gaagcactgtgtgcacagttggacagtgagggttacgtagatgcatgtgtcacagctgac
agtgatgcattcctctttggggctaaatgtgtgataaaatttgttcggcccaattccaaa
gaaccatttgaatgctaccatatgtcagatattgaagccggtcttgggttaaagaggaaa
cacttgatagccatctctcttttggttggaaatgaccatgatttaaatggggtgcaaggc
attgggcttgatactgctctacgttttgtacaagctttttctgaagatgagatattgaat
aggttacatgaaataggcagtggagatagtccaatatttcaaggtgctataaaatcttta
gatgactgtgtacctgtctcgagtgagagctcactgaagataaaatattctcattgttcc
ctctgtggacatcctggcagcaagagagctcattttaagtcttcttgtgaatactgcagt
actagtaatggtgagggttgcatgaaaaaaccggaggggtttaaatgtgattgctcctcc
tgtgatatggatcggagagaaaaggaacagaagaagcaagaaaattggagaataaaagtt
tgcaacaagatagctatggagtcaaatttccccaatgatgagattattaaaatgtatttg
tgcagcaaccatggtgattttactgaagaagttggtccttgcatatcatggggaagcccg
aatactgaaatgcttgttgatttcttagcttttcatcagcactgggagccatcctacatt
cggcggatgatgcttcctatgttgtccaccgtgttcttacgagaaatggcaataaatcct
gtaaaaactttgttatatgggcagtatgagtttgactctatacagcgtctgaagataaga
tatgggcatcaattctatgtggtcaagtggaaaaaaactgtgcctgccctgggcagtatt
atgaattcaatcctttctgaggagtctgatatgcaacaagatgttgtggatgttgatgaa
tctcttgatttaggggacgagtctgagggccccaggattcatgttgaggagggtagctgc
taccttttgacagatgagaatatggacattgttcgggctgcttttccagaagaagttgac
agatttttgcatgaaaaggaattaaaagaatccaaacgaaaaaagagttcaagcttaaga
tctgaagggacaaatgaaaagtcagaattaaaaagttcacgaggtgtccaactaagtatt
actgaattctaccgttcaaccaaagttcaaattcagttaaaaccaggagaagatctaccg
agggtttctgatagtcagggtgatgggacctcaaaagagaagagaaaagtgtcaaatcca
aatctttccaagtctgttaggcgtcgccttttgttcaagtag
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