Quercus lobata (valley oak): 115955974
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Entry
115955974 CDS
T07350
Name
(RefSeq) putative pectate lyase 21
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo00040
Pentose and glucuronate interconversions
qlo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115955974
Enzymes [BR:
qlo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
115955974
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
T4_y05I_N
Motif
Other DBs
NCBI-GeneID:
115955974
NCBI-ProteinID:
XP_030930262
UniProt:
A0A7N2M822
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Position
8:4176521..4179255
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AA seq
400 aa
AA seq
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MSAFFLFYLVLLLHATLPSSARTLMQISEATEWSSTRRQLGTGSCRTGNPIDDCWRCDPD
WETNRKMLADCAVGFGRNAIGGRDGEFYVVKDSDNDDPDNPVPGTLRHAVVQEEPLWIIF
DHDMVINLKEELIMSSYKTIDGRGFNIQISDGPCITIQNASNIIIHNIYVHDCIPAWKAM
GQVAPQHSDEKSDGDGISIFGARDVWIDHCTLSNCYDGLIDAVYGSTSITISNSYMFDHN
EVMLMGHNDDFLDDKNMQVTIAFNFFGAGLVQRMPRCRHGYFHIVNNFYAGWEMYAIGGS
ANPTINSQGNVFIANDDNSTKEVTKRENSESGEWQNWNWRSDEDVMLNGAYFTPSGQETA
ASYIRATSMVARPASHLINTPPSAGVLDCQIGIQCYIPKR
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctttctttctcttctatttagttttgctcttacatgccacccttccatcctct
gcacgtacattgatgcagatatcagaagcaactgaatggagctcaacaagaaggcagttg
gggacaggatcatgcagaactggaaaccccattgatgactgctggagatgtgaccctgac
tgggaaaccaaccgcaagatgctagctgattgtgcagtagggttcggacgcaatgctatt
ggaggaagagatggtgaattctatgttgtcaaagattcagacaatgatgaccctgataac
ccagttccaggcactctccggcatgctgtagtccaagaagaacctctctggatcattttc
gatcatgacatggtcatcaatttaaaggaagagcttatcatgagctcatacaagaccatt
gatggtagaggatttaacatacaaatatcagatggaccatgcataactattcaaaatgcg
agtaacatcatcatacataacatctacgtacatgactgcataccagcgtggaaagccatg
gggcaggtagcaccacagcattctgatgaaaaatcagatggagatggtatatccatattt
ggggctagggatgtttggattgatcactgcacactatcaaattgctatgatggacttatt
gatgctgtatacggatcaacatccataacaatctcaaacagctacatgtttgatcataat
gaagtcatgctcatgggtcataatgatgacttccttgatgacaagaatatgcaagttacc
attgccttcaacttctttggggcaggactggttcaaagaatgccaaggtgtaggcatgga
tattttcacattgtaaacaatttttatgctggatgggagatgtatgcaattggtggaagt
gccaatcccacaattaatagccaaggaaatgtctttattgcaaatgatgacaactccaca
aaagaggtgactaaacgtgaaaactcagaatctggggagtggcagaattggaattggagg
tcagatgaagatgtgatgctgaatggtgcttactttacaccttctggacaagaaactgct
gcaagttacataagagcaacaagcatggttgcaagaccagcttcacatctaataaatacc
cctccatctgctggagttcttgattgtcagataggcatccaatgctatattccaaagcga
tga
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