Quercus lobata (valley oak): 115956009
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Entry
115956009 CDS
T07350
Name
(RefSeq) ATP-dependent DNA helicase PIF1-like
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
qlo03032
]
115956009
03029 Mitochondrial biogenesis [BR:
qlo03029
]
115956009
Enzymes [BR:
qlo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
115956009
DNA replication proteins [BR:
qlo03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
115956009
Mitochondrial biogenesis [BR:
qlo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
115956009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_19
AAA_30
Pif1_2B_dom
DEAD
AAA_22
PhoH
AAA_16
ResIII
UvrD-helicase
ATPase
AAA_11
Herpes_Helicase
nSTAND3
NPHP3_N
AAA_5
SLFN-g3_helicase
NTPase_1
ATPase_2
AAA_7
NACHT
TsaE
ABC_tran
Mg_chelatase
Sigma54_activat
cobW
MeaB
TrwB_AAD_bind
NB-ARC
T2SSE
AAA_29
MobB
P-loop_TraG
ATP-synt_ab
RNA_helicase
AAA
Motif
Other DBs
NCBI-GeneID:
115956009
NCBI-ProteinID:
XP_030930312
UniProt:
A0A7N2MBY6
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All DBs
Position
8:complement(43666952..43671574)
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AA seq
526 aa
AA seq
DB search
MGFITTAIAAYRYFSTNSIGKSTKFAQNRFRSKTKTKNSEPRKPRTRIKWTDQQKQIISA
ISEGNSVFITGSAGTGKTLLVNHIIKLLKKCHHRSGVFVTAPTGVAACAIGGQTLHSFAG
IGPGVGDRHTLLDRVLSDKKAYNRWKKVEALVVDEISMVGAELFENLEYIAREIRGEDEV
WGGIQLVVSGDFFQLPPILCKWNASGKEFAFEADCWNASFDFQYELTEVFRQSDSRFIKL
LQGIRRGECEAQDIEFLEQSCLVTESESDPSVVQLYPLNKDVETVNQMRMEELAKEGTIY
LAVDSGNNPWKNQLNQGIAPDEIFLCEGARVMLIKNLSTWRGLVNGATGTIIGFREPENM
DVTDMCYDNLLPIVRFDSGLTMVITPAKWVVMEGDKVVAERKQIPLILSWALSIHKCQGM
TLDKLQTNLSSAFGYGMVYVALSRVRSLEGLKLQGFRPSKIKAHPKVLQFYKVFVSERDT
EVKNDGANKISDRSSEVAHVTDTRSNGATKYHFSLSEFLSSRQKRK
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggggtttatcaccactgcaatagcggcatacagatactttagcaccaatagtattggg
aaaagcacaaaatttgcacaaaataggtttaggagtaaaaccaagaccaaaaacagtgaa
cccagaaaacctaggaccagaatcaagtggactgaccaacaaaaacaaatcatatctgcc
atttctgagggaaattcagtgttcatcacgggctcggcaggaactggtaaaacattattg
gttaatcatattatcaaactgttgaaaaaatgtcatcaccgatctggggtctttgtcaca
gcgcccactggcgttgctgcatgtgctattggtggacaaacactgcactcgtttgcaggc
attgggcctggagtgggggatcgccacactttgctagatagggttctttcagataagaag
gcttacaataggtggaaaaaagttgaggcattggttgttgatgagattagcatggttggt
gcagagttgtttgagaatcttgaatacattgcgagagagatacgtggtgaagatgaggtg
tggggtggaattcagcttgttgtgagtggagatttctttcagctaccaccaattctttgt
aagtggaatgcatcaggcaaggagtttgcattcgaagctgactgctggaatgcgagtttt
gattttcaatatgagcttactgaggtttttaggcaatcagattcgcgatttatcaagctg
cttcagggtataaggagaggggaatgtgaagctcaggacatagaatttcttgaacaatct
tgcttggtgactgagtctgagtcagatccttcggtggtacagctatatccattgaataaa
gatgtggaaacagtaaatcagatgaggatggaagaattggcaaaggagggtactatatat
ttagcagttgatagtggtaacaatccttggaagaatcaactcaatcagggaattgcacct
gatgagattttcctctgcgaaggtgcgagggtgatgctgatcaagaatctgagtacttgg
cgtggactagtgaatggtgccactggtacaattataggatttcgtgagccagagaatatg
gatgtgacagacatgtgttatgacaacctgctaccaattgtcagattcgattcagggcta
accatggtgattacaccagcaaagtgggttgtgatggagggagataaagttgttgctgaa
agaaagcagatacccctcatactgtcatgggctctaagtattcacaagtgccagggtatg
actcttgataaacttcaaaccaatctatccagtgcttttggctatggaatggtctatgta
gcactttcccgtgtgagaagcttagaaggccttaagttacaaggttttaggccttcgaag
attaaggcacacccaaaggttttgcaattctacaaagtttttgttagtgaacgagataca
gaagtcaagaatgatggagccaacaagatcagtgatcggagcagtgaggtagctcatgtt
acagacacaagaagcaatggggcaacaaaatatcatttttctctttctgaattcctgtct
tcacgccaaaaaagaaaatga
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