Quercus lobata (valley oak): 115956273
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Entry
115956273 CDS
T07350
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo00040
Pentose and glucuronate interconversions
qlo01100
Metabolic pathways
Module
qlo_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115956273
Enzymes [BR:
qlo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
115956273
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
115956273
NCBI-ProteinID:
XP_030930559
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Position
8:complement(8381848..8383676)
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AA seq
370 aa
AA seq
DB search
MVFNVMKDGAIADGNSDNSKVFQNVFNKACQSEGRNLVLIPRGTYMLAPIVLKGPCKGQV
EFHIIGTLKALIDETSTIDINHWITFQYVDRLVLSGGGKLDGQGPSAWDDNTCSKNPNCK
ALPISLRFDFVTNSRITQLTSMNSKNAHVNVFACKDMKFDHIHIIAPKDSPNTDGIHIGS
SNNIQILDSTIATGDDCVSMSPGSKNINIRNVTCGPGHGISVGSLGGGPNEEDVNGLTVT
NCTFIGTQNGLRVKTWARSYASSVFNLTFEDIIMDNVNNPIIIDQQYCPSRNCEKGESQV
QIQDVKYRNIRGTSSSKIAVAFDCSKGKPCEKIELNNINLTYHGAEGAVASSCSNVKGIA
NGQQQPGSCI
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggtttttaatgtgatgaaggatggtgctattgctgatggaaatagtgataacagtaag
gtttttcaaaatgtattcaacaaagcttgtcaatctgaaggaaggaatcttgtattaatc
ccacgagggacatatatgttggcgcctattgtgttgaaaggaccatgcaagggccaagtg
gaatttcatatcatagggacactaaaagctcttatagatgaaacatctactattgatatt
aaccattggatcaccttccaatacgtagaccgattggtactaagtggtggtgggaaactg
gatggccaaggtccctccgcttgggatgacaatacttgcagtaaaaatccaaactgcaaa
gctcttcccatttcattgagatttgatttcgtcaccaattcaaggattactcaactaact
tcaatgaatagcaagaatgcccacgtgaatgtatttgcatgcaaagatatgaaattcgat
cacatccatataatagcacccaaagatagccccaataccgatggaatacacattggttca
tccaacaatattcaaatcttggattcaacaatagccactggagatgattgtgtatcaatg
agccctggttctaagaacataaacattaggaacgtaacgtgtggcccgggtcatggaatt
agtgttggaagccttggtgggggacctaatgaagaagatgtcaatggattaacggtaact
aattgcactttcattggcactcaaaatggcttgagggtcaaaacatgggctaggtcttat
gctagtagtgttttcaatcttacctttgaagacatcatcatggataacgtcaacaacccc
atcatcattgatcaacaatattgcccatctcgcaattgtgaaaagggtgaatcccaagtt
caaattcaagatgtgaagtacagaaacatcagaggcacctctagctcaaaaattgcagtt
gcttttgattgtagcaaaggcaaaccttgtgagaagattgagctcaacaacattaaccta
acttaccatggtgctgaaggagctgtggcatcctcatgttctaatgtcaaaggtattgct
aatggtcaacaacaacccggatcttgcatatag
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