Quercus lobata (valley oak): 115956426
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Entry
115956426 CDS
T07350
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 32
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
qlo03009
]
115956426
Enzymes [BR:
qlo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115956426
Ribosome biogenesis [BR:
qlo03009
]
Eukaryotic type
90S particles
Helicases
115956426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
TX13_rpt
Motif
Other DBs
NCBI-GeneID:
115956426
NCBI-ProteinID:
XP_030930672
UniProt:
A0A7N2R8S6
LinkDB
All DBs
Position
8:10550065..10556212
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AA seq
739 aa
AA seq
DB search
MKKPKSKQFRNKLRVSERETIKLLDSWIQSQKPDSGSNPMSLPPLPSNSPIGCLGGDSFS
RYAGATRFDQLPLSKKTVDGLRDAGYVEMTDVQRATLPHALCGRDILGAAKTGSGKTLAF
VIPVLEKLYRGTWGPEDGVGSIIISPTRELAGQLFDVLKTVGKRHNFSAGLLIGGRKDID
TEKEHVNRLNILVCTPGRLLQHMDETPNFECSLLQVLVLDEADRILDVGFKKALNAIVSQ
LPKNRQTLLFSATQTKSVQDLARLSLKDPEYLSVHEESVTSTPNLLQQTAMVVPLDQKLD
MLWSFIKSHLNSKILVFLSSCKQVKFVYEAFKKLRPGIPLKCLHGRMKQGRRMGIYSEFC
EQRSVLFSTDVASRGLDFNKAVDWVVQVDCPEDVKAYIHRAGRTARYHSGGRSVLFLMPS
EMKMLEKLQAQKVPIQFIKANKKRLQPVSGLLSALLVKYPDMQYQAQRAFVTYLRSIHIQ
KEKEIFDVTKLPIDEFSASLGLPMTPKIRFLKQKNKSKTASETISLPASENSDRENLLEI
PKEMLDIGDIDEEEMDKAFLLKQDTPNEEEEKISEITDARPATRISKKKKLKINIHRPMG
TRLVYDDEGNALPPLARVAEIKSGNESFVVDQGKKNEYYNKMREEMKQVDKEDKLLDRQR
RREKRIKQKMKLKRGSLEEEDDEEHSASEEEATRDRPRKKSKKYYNSDSDDGERKENKDS
SSLAEQEALALKLLNAMHS
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacccaaatccaaacaattccgcaacaaactccgcgtctcagaaagagaaaca
atcaagctcctcgactcatggatccaatcccagaaacccgactccggctccaaccccatg
tctctgcctccgctgccttccaactcacctattggctgcctcggcggcgactcgttctcg
cgctacgccggtgccacgcggtttgaccagctgcccttgtcgaagaaaaccgtggatggt
cttcgtgatgctgggtatgtcgagatgaccgatgttcagagggctactctgcctcacgcg
ctctgcggaagggacattctcggcgccgcgaaaaccgggtctggaaagactctggctttt
gttattccggttctggagaagttatatagagggacatggggacctgaggatggtgtaggg
agcatcattatatctcccacacgggaattagcaggccaactttttgatgtgttaaaaact
gtaggaaagcgccataattttagtgctggccttctaattggtggtcgcaaggatattgac
acagagaaggagcatgtaaatcggctcaatattttggtttgcactcctggtcggcttctt
cagcacatggatgagactccaaactttgaatgttccctgcttcaggttttggttcttgat
gaggcagatcgtattcttgatgttggattcaagaaggctttaaatgctatcgtgtcacaa
ctacctaagaatagacaaaccttgctattctcagcaactcaaacaaagtcagttcaagat
cttgcaagactcagtttgaaggacccagagtatctcagcgtgcatgaggagtctgtaact
tccactcccaacctcttgcagcaaactgcaatggttgttcctcttgaccaaaagttagat
atgttgtggagtttcataaagtcacatcttaattcaaagatcctagtgtttctttcaagc
tgtaaacaggtcaaatttgtctatgaagcatttaagaaactgcgtcctgggataccctta
aagtgtcttcatgggaggatgaagcaggggagaaggatgggtatatattcagaattctgt
gagcagcgttcagttctcttctcgaccgatgtggcctcgagaggccttgattttaacaag
gcagtcgattgggttgtccaggtggactgtccagaagatgttaaagcttacatacacaga
gctggtcgcactgctcgctatcattctggagggaggtctgttttatttctgatgccctca
gaaatgaaaatgcttgaaaaattacaagcacaaaaagtacccatacaatttattaaggca
aacaaaaaaagactacaacctgtttctgggctgttgtcagcattactagttaagtatcca
gatatgcagtatcaggcccaaagagcctttgtgacatatttgcggtctattcatattcag
aaggaaaaagaaatttttgatgtgacaaaactgcctattgatgaattttcagcatcattg
ggtctcccaatgactccgaaaatccgtttcttgaagcagaaaaacaagtcaaaaacagca
tcagagacaatttctcttcctgcatctgaaaactctgacagggagaatctgctggagatt
cccaaagagatgctagatatcggtgatatagatgaagaggaaatggacaaagcttttctt
ctaaagcaggatacaccaaatgaggaagaggagaaaataagtgaaatcacagatgctagg
cctgcaacacggatttcaaagaagaagaagttaaaaataaatatccacagaccaatgggt
actaggcttgtttatgatgatgaaggcaatgcactacctccacttgcgagggtggctgaa
ataaagagtggcaatgaatcatttgtggttgaccaaggcaaaaagaatgagtattataac
aagatgagggaagagatgaagcaggtagacaaagaagacaaactactagatcgccaacgt
cgcagagagaaacgtatcaagcagaagatgaagttgaaaagaggaagcttggaagaagag
gatgatgaagaacattctgcatcagaagaggaagctactagagacagaccccgtaaaaag
tcgaagaaatattacaatagtgacagtgatgatggtgagagaaaagaaaataaggactcc
tcctccttggcagaacaagaagcactagcactcaagttactaaatgccatgcactcctaa
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