Quercus lobata (valley oak): 115957284
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Entry
115957284 CDS
T07350
Name
(RefSeq) serine/arginine-rich splicing factor RS31-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115957284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qlo03041
]
115957284
Spliceosome [BR:
qlo03041
]
Common components
Common spliceosomal components
SR proteins
115957284
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
SET_assoc
RRM_5
RRM_3
RRM_8
RNA_bind
RRM_Nup35
RRM_fung
Phage_TAC_14
Motif
Other DBs
NCBI-GeneID:
115957284
NCBI-ProteinID:
XP_030931357
UniProt:
A0A7N2MD53
LinkDB
All DBs
Position
8:complement(46096861..46100391)
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AA seq
252 aa
AA seq
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MRPIFVGNFEYDTRQSELERLFGKYGKIERVDMKSGFAFVYFVDERDAEEAIRAVDNRPF
GYDRRRLSVEWARGERGRPRDGSRSGANQRPTKTLFVINFDPIRTTVRDIERHFEQYGRI
LHVRIRRNFAFVQFETQEDATRALEATHMRKLLDRVVSVEYALRDDDDRGDGSYNSPKRG
GYGGRGVSPYRRSPSPVYRRRPSPDYGRPGSPVYDRYNGPTYDRHRGPDYGRNRSPEFGR
YRSRSPVRRSRT
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgattttcgtgggaaactttgagtacgatactcgccaatctgaactggaacgc
ttgttcggaaagtacgggaagattgagcgcgtcgacatgaaatctggctttgctttcgtt
tattttgtggatgagcgtgatgctgaagaagctattcgtgccgttgataataggccgttt
ggttatgacaggcgtaggctgtcagtggagtgggcaaggggtgaacgaggtcggcctcgt
gatggatctaggtcaggggcaaaccagaggcctactaaaaccttgtttgtaattaacttt
gatccaatacgcacaactgttcgcgatatagaaagacactttgaacaatatggaaggatt
cttcatgtccgaattcgacgtaactttgcatttgtccagtttgaaactcaggaggatgct
accagagcccttgaggctactcacatgagaaagctattagacagagtggtttcggttgag
tatgctttgagggatgatgatgataggggtgacgggagttacaatagccctaaaagagga
ggttatggtgggcgtggggttagtccttaccgaaggtcaccaagtccagtgtatcgcagg
cggccaagtcctgactatggtcgtcctggcagccctgtttatgataggtacaatgggcca
acatatgacaggcacaggggtcctgattatggtaggaacaggagtcctgaatttggccga
taccgaagccgatcacctgttagaaggtcaagaacttga
DBGET
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