Quercus lobata (valley oak): 115957298
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Entry
115957298 CDS
T07350
Name
(RefSeq) protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5
KO
K12199
vacuolar protein sorting-associated protein VTA1
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115957298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qlo04131
]
115957298
Membrane trafficking [BR:
qlo04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
115957298
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Gene cluster
GFIT
Motif
Pfam:
Vta1
Vta1_C
Motif
Other DBs
NCBI-GeneID:
115957298
NCBI-ProteinID:
XP_030931374
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Position
8:7579607..7589377
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AA seq
441 aa
AA seq
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MAGENEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQSERTKTTNSLLISLM
KQLEKDKKSLKLGPEDRLHLEGFALNVFAKADKQDRAGRADLNTAKTFYAASIFFEIINQ
FGVLQFDLEEKQKYAAWKAADIRKALKEGRKPNPGPPAGDDDLSIPSLSGSYDIGPSETA
VTSPGPESDPSLQFHDKGNSLHSTQSLPSSRGHDIDNPHSTNIPPAAQFHDRDDQHSPII
PPAVQFHDKDNQRSTYVSPSPPSYPTSSYPSHDFHPPPATNSSESPTYPQPYHHQSYPQE
PQQHLPSNFPPHETSSYSYPHFQTYPSFSESSLPAVPSNYPSYYQGSDASYSHHTAPPVT
NYTPNAPQRSSSTNGTVSEPSPAAAQTYQYDSNYQPSPEKIAEAHKAARFAVGALAFDDV
SIAVDYLKKSLELLTKPSASH
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgagaacgagccagcgaagcttctcctaccgtatctccaacgcgccgatgag
ttacaaaagcacgagcctctcgtcgcttattactgtcgattatacgcaatggaacgaggg
ctcaaaataccacaaagcgagcgcaccaaaaccaccaattccctccttatttccctcatg
aaacagctcgaaaaggacaagaagtcactaaagttggggcctgaagaccgattgcatctg
gagggttttgccttaaatgtctttgcgaaggcagacaagcaagatcgtgcaggacgagct
gacttgaataccgcaaaaacattttatgctgcaagcattttctttgagattatcaaccag
tttggggtactccaatttgatcttgaggagaagcagaagtatgcagcttggaaagcagca
gatataaggaaagctttaaaagaaggaaggaagccaaacccaggcccgcctgctggtgat
gatgatctgtcaattccctcacttagtggctcatatgatattgggccaagcgaaactgca
gttaccagtcctggacctgaatctgatccatcacttcagttccatgataaaggaaacagc
ctgcattctacacaaagtcttccatcgtcacggggccatgatattgacaacccgcattct
acaaacattcctccagctgctcagttccatgatagggatgaccaacattctccaatcatt
cctccagcagttcagttccatgataaagacaaccagcgttcaacctatgtttcaccatca
cctccttcttaccctacttccagttacccatcccacgactttcatccaccacccgcaaca
aacagttcagaaagtcctacttatcctcagccataccaccatcaatcttacccacaagaa
cctcaacagcatctgccttccaatttccctcctcatgaaacttcctcttactcttatccc
catttccaaacttatccaagtttttcagaaagtagcctccctgcagttccatctaactat
ccttcttactatcagggctctgatgcttcctactctcatcacacagctcctcctgtgaca
aactacacaccaaatgccccacagcgttcgagcagcacaaatgggactgtttcagaacct
tcccctgctgctgctcaaacatatcaatatgacagtaactatcagccatcacccgagaaa
attgccgaggcacataaagctgcaagatttgcggtaggggcgctggcatttgacgacgtg
tcaattgcagtagactacttgaagaaatcgcttgaattgctgacaaaaccatccgccagt
cactaa
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