Quercus lobata (valley oak): 115957397
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Entry
115957397 CDS
T07350
Name
(RefSeq) mRNA-decapping enzyme subunit 2
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115957397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115957397
Enzymes [BR:
qlo01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
115957397
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115957397
mRNA degradation factors
5'-3' decay
Decapping complex
115957397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
115957397
NCBI-ProteinID:
XP_030931484
UniProt:
A0A7N2R9T2
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All DBs
Position
8:55781917..55788913
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AA seq
321 aa
AA seq
DB search
MSGIHRSSGAALKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV
EKNPSLKSFTLKEFTSLLFNRCDVLKPYVAHLDDIFKDFTSYKVRVPVTGAIILDETYER
CVLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDVSKFLNKDEYIELIFGQQRV
RLYIIAGVKDDTSFAPLTKKEISEIAWQRLDELQPANDDVISRGITGLKLYMVAPFLASL
KSWISTHQSPIAPKPDMPLKGMCVWKAKNSSTGNSSSSSPMIMESQSTKPEPDNPAPGKS
FRNFRFDTSSILQAMETAFSA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcatccaccgctcctctggtgctgcactgaaaaacggcctccctccccaggaa
ctcctcgacgatctctgcagtcggtttgttttaaatgtaccaaaagaagacctccagtca
tttgagagaattttgtttctcgtggagtatgcacattggttctatgaagacaattcagtg
gaaaagaatccatcgctgaagtcattcactctgaaggagttcacttctttattattcaac
agatgtgacgtcctaaaaccttatgttgcccatttggatgacatttttaaggacttcact
tcctacaaggtccgagttcctgtaactggggcaatcattttggatgagacctatgaacgg
tgtgtgctagtgaagggttggaaagggtcaagctggagttttccacgaggcaaaaagagc
aaagatgaggaagaccacgcatgtgccatcagagaagtcctggaggaaacaggttttgat
gtttctaagtttcttaacaaagatgaatacattgagttgatatttggacagcagcgagtg
cggctctacataattgctggtgtgaaagatgacacttcctttgctccacttaccaaaaaa
gagatcagtgaaatcgcatggcaacggcttgatgaacttcagccagcaaatgacgatgtg
atatctcgtgggattactggcctcaagctttacatggtggcgcccttcttggcatctttg
aaatcatggatttcaacacatcagtccccaatagctccaaaacctgacatgcctctcaaa
ggaatgtgtgtctggaaagcaaagaacagttcgactgggaatagcagcagcagtagccca
atgataatggagagccagtcaactaaacctgagcctgataacccagcacctggcaagagc
ttcagaaactttagattcgatacctcatccatcttgcaagcaatggaaactgccttttct
gcttga
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