KEGG   Quercus lobata (valley oak): 115957419
Entry
115957419         CDS       T07350                                 
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-like isoform X1
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo04144  Endocytosis
qlo04517  IgSF CAM signaling
qlo04519  Cadherin signaling
qlo05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    115957419
   04519 Cadherin signaling
    115957419
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    115957419
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    115957419
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:qlo04131]
    115957419
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:qlo04812]
    115957419
Membrane trafficking [BR:qlo04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    115957419
Cytoskeleton proteins [BR:qlo04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     115957419
SSDB
Motif
Pfam: Beta-prop_EML_2 Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40 WD40_WDHD1_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_1st ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_WDR19_1st WDR55 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR36-Utp21_1st Tricorn_2nd Beta-prop_WDR3_2nd EIF3I WD40_Gbeta Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_HPS5 Beta-prop_EML Beta-prop_TEP1_2nd WDR90_beta-prop_4th Beta-prop_NUP159_NUP214 eIF2A Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Ge1_WD40 BNR_3
Other DBs
NCBI-GeneID: 115957419
NCBI-ProteinID: XP_030931513
UniProt: A0A7N2MEI7
LinkDB
Position
8:43297674..43312298
AA seq 378 aa
MTAIAVNQFAQSITCHAWGPDHSMVAFCPNNNEVHIYRLSQDKWEKVHVLEKHDQIVSGI
DWSPRSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK
TVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNILLATTSADGKCRIFSTFIKGVDT
KDSRTGPSSDSKFGEQIVQLDLSFSWAFGVKWSPSGDTLAYVGHNSMIYFVDEIGPSPLA
QNVAFRDLPLRDVLFVSERMVIGVGFDCNPMVFAADQRGIWSFIRFLGERKTISSGSKYG
SQFSEAFGKLYGQSKHGLSNDAVEPSRSRGGIHDNCINCILPLRRSGISTVMRFSTSGLD
GKVVIWDLENQADLSEYL
NT seq 1137 nt   +upstreamnt  +downstreamnt
atgactgcgatcgcagtgaaccagttcgctcagtccatcacttgccatgcttggggcccc
gaccactctatggttgcattctgtcccaacaataatgaggttcatatctatagattatca
caagacaagtgggaaaaggtgcatgttcttgaaaagcatgaccaaattgtttctgggata
gactggagcccaaggtccaacagaattgtaactgcatctcatgatcggaattcatatgtg
tggaacctagaaggatcagaatgggtaccaacccttgttatacttaggctaaaccgtgct
gcactttgtgttcaatggagtccaaaagaaaacaagtttgctgttggcagtggggctaaa
actgtttgtatatgctactatgagcaagagaataactggtgggtcagtaaacttatcagg
aaaagacatgattcttctgtgacaagtgttgcttggcatcccaataatattcttcttgca
acaacatccgcagatgggaaatgccgaatattttccaccttcattaaaggtgttgacaca
aaggattcaagaacaggcccttcttcagattcgaaatttggagagcaaattgttcagctt
gatctctcattttcttgggcatttggtgtgaagtggtcaccaagtggcgataccttagct
tatgtaggccataattctatgatttactttgttgatgaaattggtccttctcctttggct
caaaatgttgcattccgtgatttgcctctccgtgatgttctatttgtttctgagagaatg
gtcattggagtgggatttgactgcaaccctatggtttttgcagcagaccaaagaggaata
tggagctttataagattccttggtgaaaggaaaacaatttcttcaggatcaaaatatggt
tcacagttttctgaagcatttgggaaactatatgggcaatcaaagcatggattgagcaat
gatgctgttgaaccttcaagatcacgtggaggcattcatgataactgcataaattgtatt
ctgccacttagacggtcagggatctccacagtaatgcgcttcagcacttcaggattggat
ggaaaagtggttatatgggatttggagaaccaagcagatctatccgaatatttataa

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