KEGG   Quercus lobata (valley oak): 115957419
Entry
115957419         CDS       T07350                                 
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-like isoform X1
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo04144  Endocytosis
qlo04517  IgSF CAM signaling
qlo05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    115957419
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    115957419
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    115957419
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:qlo04131]
    115957419
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:qlo04812]
    115957419
Membrane trafficking [BR:qlo04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    115957419
Cytoskeleton proteins [BR:qlo04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     115957419
SSDB
Motif
Pfam: Beta-prop_EML_2 Beta-prop_WDR5 Beta-prop_THOC3 WD40 WD40_WDHD1_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_1st ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_WDR19_1st WDR55 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR36-Utp21_1st Tricorn_2nd Beta-prop_WDR3_2nd EIF3I WD40_Gbeta Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_HPS5 Beta-prop_EML Beta-prop_TEP1_2nd WDR90_beta-prop_4th Beta-prop_NUP159_NUP214 eIF2A Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Ge1_WD40 BNR_3
Other DBs
NCBI-GeneID: 115957419
NCBI-ProteinID: XP_030931513
UniProt: A0A7N2MEI7
LinkDB
Position
8:43297674..43312298
AA seq 378 aa
MTAIAVNQFAQSITCHAWGPDHSMVAFCPNNNEVHIYRLSQDKWEKVHVLEKHDQIVSGI
DWSPRSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK
TVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNILLATTSADGKCRIFSTFIKGVDT
KDSRTGPSSDSKFGEQIVQLDLSFSWAFGVKWSPSGDTLAYVGHNSMIYFVDEIGPSPLA
QNVAFRDLPLRDVLFVSERMVIGVGFDCNPMVFAADQRGIWSFIRFLGERKTISSGSKYG
SQFSEAFGKLYGQSKHGLSNDAVEPSRSRGGIHDNCINCILPLRRSGISTVMRFSTSGLD
GKVVIWDLENQADLSEYL
NT seq 1137 nt   +upstreamnt  +downstreamnt
atgactgcgatcgcagtgaaccagttcgctcagtccatcacttgccatgcttggggcccc
gaccactctatggttgcattctgtcccaacaataatgaggttcatatctatagattatca
caagacaagtgggaaaaggtgcatgttcttgaaaagcatgaccaaattgtttctgggata
gactggagcccaaggtccaacagaattgtaactgcatctcatgatcggaattcatatgtg
tggaacctagaaggatcagaatgggtaccaacccttgttatacttaggctaaaccgtgct
gcactttgtgttcaatggagtccaaaagaaaacaagtttgctgttggcagtggggctaaa
actgtttgtatatgctactatgagcaagagaataactggtgggtcagtaaacttatcagg
aaaagacatgattcttctgtgacaagtgttgcttggcatcccaataatattcttcttgca
acaacatccgcagatgggaaatgccgaatattttccaccttcattaaaggtgttgacaca
aaggattcaagaacaggcccttcttcagattcgaaatttggagagcaaattgttcagctt
gatctctcattttcttgggcatttggtgtgaagtggtcaccaagtggcgataccttagct
tatgtaggccataattctatgatttactttgttgatgaaattggtccttctcctttggct
caaaatgttgcattccgtgatttgcctctccgtgatgttctatttgtttctgagagaatg
gtcattggagtgggatttgactgcaaccctatggtttttgcagcagaccaaagaggaata
tggagctttataagattccttggtgaaaggaaaacaatttcttcaggatcaaaatatggt
tcacagttttctgaagcatttgggaaactatatgggcaatcaaagcatggattgagcaat
gatgctgttgaaccttcaagatcacgtggaggcattcatgataactgcataaattgtatt
ctgccacttagacggtcagggatctccacagtaatgcgcttcagcacttcaggattggat
ggaaaagtggttatatgggatttggagaaccaagcagatctatccgaatatttataa

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