KEGG   Quercus lobata (valley oak): 115957704
Entry
115957704         CDS       T07350                                 
Name
(RefSeq) WD repeat domain-containing protein 83-like isoform X1
  KO
K13124  mitogen-activated protein kinase organizer 1
Organism
qlo  Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:qlo03041]
    115957704
Spliceosome [BR:qlo03041]
 Complex C
  Other components
   Complex C specific factors
    115957704
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR3_2nd EIF3I WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 WD40_Gbeta Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_SPT8 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_ACSF4 Beta-prop_WDR41 Beta-prop_DCAF4 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_Aladin WDR90_beta-prop_4th NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_Vps41 Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N VID27 Beta-prop_NOL10_N WD40_CFAP43 VPS11_N
Other DBs
NCBI-GeneID: 115957704
NCBI-ProteinID: XP_030931875
LinkDB
Position
8:complement(47152878..47160296)
AA seq 304 aa
MSELEVPGKEANVLKGHEGAVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHA
REVRDVHVTPDNSKLCSCGGDRQIFYWDVSTGRVIRKFRGHDGEVNAVKFNEYSSVVVSA
GYDQSLRAWDCRSHSTEPIQCLDLQIIDSFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRI
GREISDDLGQPVNCISLSNDGNCILASCLDSTLRLLDRTSGELLQEYKGHTCKSYKLDCC
LTNTDAHVTGGSEDGFIYFWDLVDASVVSSFRAHSSVVTSVSYHPKDSCMITASVDGTIR
VWKT
NT seq 915 nt   +upstreamnt  +downstreamnt
atgagcgaattggaagttccagggaaggaggcaaacgtgttgaaaggtcatgagggagca
gtattagcagcgagattcaacagcgacggaaactattgtctgagttgcggcaaagaccgt
accatacgcctctggaatccccaccgtggcatccacatcaagacctacaaatcccacgcc
cgtgaagtccgtgacgtccacgtcaccccggataattcgaagctgtgttcatgtggtgga
gaccgacaaatcttttactgggatgtatcaacgggtcgtgttattcgtaaatttcgtggc
catgatggcgaggtgaatgctgtaaagttcaatgagtattcgtctgtcgtagtttcagca
ggctatgatcaatcattgcgtgcttgggactgcagatctcacagcactgagccaattcag
tgccttgatttgcagattattgattcattttcagacagtgttatgtctgtctgtttaaca
aaaagtgaaattattggtggaagtgttgatggaactgttcgaacatttgacatacgtatt
ggtagagaaatatctgatgacttggggcaaccggtcaactgtatctctttgtcaaatgat
ggtaactgcatattagccagttgcttagattctactttacgccttctagacagaacttct
ggtgaactattgcaagaatataaaggccatacttgtaagtcctacaaactggattgctgc
cttaccaacactgatgcacatgtaactggtggatctgaggatggcttcatttacttctgg
gatctggtagatgcatctgtagtgtcaagtttccgtgctcattcctcagtggtgacaagt
gtgagttaccacccaaaggacagctgcatgataactgcctccgttgatggcaccattcgt
gtttggaagacatga

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