Quercus lobata (valley oak): 115957709
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Entry
115957709 CDS
T07350
Name
(RefSeq) autophagy-related protein 18c
KO
K22991
WD repeat-containing protein 45
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qlo04131
]
115957709
Membrane trafficking [BR:
qlo04131
]
Autophagy
Other autophagy associated proteins
Others
115957709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WDR55
Beta-prop_IFT140_2nd
BCAS3_WD40
Beta-prop_IFT122_1st
EIF3I
Beta-prop_EML
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_HPS5
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
115957709
NCBI-ProteinID:
XP_030931883
UniProt:
A0A7N2MGT5
LinkDB
All DBs
Position
8:65267519..65272801
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AA seq
417 aa
AA seq
DB search
MSSTVSTSRGLLPPARIGTCETPNAGPSGSFSQPELEFNHTDDTELLSVSWNQDYGCFAA
GTSRGFRIYNCDPFKETFRRDLKSGGFKIVEMLFRCNILALVGGGANSQYPPNKVMIWDD
HQSRCIGEFAFRSEVRAVKLRRDRIVVVLEHKIYVYNFMDLKLLHQIETLANPRGLCCLS
HHSNAFVLACPGLQRGQVRIEHFGLNMTKLIQAHDSQIACLTLTMDGLLLATASTKGTLI
RLFNTMDGSRLQEVRRGGNRAEIYSIALSPNVQWLAASSDKGTVHIFSLRVRVVGEDSSA
QSNAAQGLAMLQQNSSTALDALISPNTGANPGSSLSFMRGVLPKYFSSEWSFAQFHLPED
TQFISAFGSQNTVVIVGMDGSFYRCSFDPVHGGEMLQQEYVRFLKTERGLDRDVLIA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaacagtttcaacatctcgaggattacttccaccggcaaggattggcacctgt
gaaaccccaaacgccgggccttctggatctttcagccagcctgaactggagttcaatcac
actgatgacactgagttactctctgtatcttggaatcaggactatggttgctttgctgct
ggcacaagccgtggttttcgtatctataactgtgaccctttcaaggaaacttttagacgt
gatttgaaaagcgggggttttaaaattgttgagatgctcttcaggtgcaacattctggca
cttgttggtggtggagctaattcccagtatccaccaaataaagttatgatttgggatgat
catcagagccggtgcattggtgaatttgcatttaggtctgaggttcgtgctgtgaaatta
agacgggatcggatcgttgttgttcttgagcacaagatttatgtatacaactttatggat
ctgaagcttcttcatcagattgagactctggcaaatcctaggggtttgtgctgcctctca
caccattcgaatgcatttgtgttggcttgcccaggtcttcaaagaggacaggttcgaatt
gaacattttgggctgaatatgacaaaattaattcaagctcatgattctcagattgcatgc
ctcaccttgacaatggatgggctgcttcttgcaactgctagtacaaaaggcactttgata
agactatttaacacaatggatgggagtcgcttacaagaggtacgtagaggaggcaacaga
gcagaaatttatagtattgcgctctctccaaatgtccaatggttggcagcatcaagcgac
aaaggtactgttcatatatttagcctcagagttagagtggttggggaggactcatctgct
cagtcaaatgctgctcaagggctagcaatgttgcagcagaattcttcaactgccctagat
gctcttatttctccaaatactggtgccaaccctgggtcatcattatcttttatgagaggg
gttttaccaaaatatttcagctcagaatggtcatttgctcagttccacttgccagaagac
acacaattcatttcagcgtttggatctcagaacactgttgttatagttggtatggatggg
agcttctacagatgcagcttcgacccagtgcatggaggggagatgctacagcaggaatat
gtacgctttctaaaaactgaaagaggcctggatagggatgtactgatagcatga
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