Quercus lobata (valley oak): 115957930
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Entry
115957930 CDS
T07350
Name
(RefSeq) syntaxin-51-like isoform X1
KO
K08503
syntaxin of plants SYP5
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
115957930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qlo04131
]
115957930
Membrane trafficking [BR:
qlo04131
]
SNARE
SNAP-25[C] (Qc)
STX8
115957930
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Gene cluster
GFIT
Motif
Pfam:
SNARE
NPV_P10
STX6_10_61_N
CLZ
LIF_OSM
DUF2976
Motif
Other DBs
NCBI-GeneID:
115957930
NCBI-ProteinID:
XP_030932135
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All DBs
Position
8:7885578..7890861
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AA seq
237 aa
AA seq
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MIMSMAASADSWVKEYNEAVKLADDINGMISERSSLPATGPDAQRHASSIRRKITILGTR
LDSLQSLLSKIPGKQPITEKEMNRRKDNLANLRSKVNQMASTLNMSNFANRDSLIGPEIK
PADAVSRTVGLDNSGLVGLQRQVMKEQDEDLEKLEVTVVSTKHIALAVNEELDLHTRLID
DLDQHVDVTDSRLRRVQKNLAILNKRTKGGCSCMCLLLSVIGIVVLVAVIYLLIKYL
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgtcaatggcagcttctgcagactcatgggtgaaggaatacaatgaagcagta
aaacttgccgatgatatcaatggcatgatttctgaacgtagttcattgcctgcaacagga
ccagatgctcagcgtcatgcatcttctatacggaggaagatcacaatattagggactaga
cttgatagcttacagtcccttttgtcaaagattcctggaaagcagcccataacggagaaa
gagatgaatcgtcgcaaggacaatcttgcaaatttgagatcaaaagttaaccagatggct
tcaacattaaacatgtcaaattttgctaacagagacagcttgattggcccagaaataaag
ccagctgatgctgtgagcagaacagttggcttggacaactctggccttgtcgggcttcaa
cgacaagttatgaaagagcaagatgaggatcttgagaagttggaggtgactgtagtaagt
acaaaacatattgcattggcagtcaacgaagaacttgaccttcacactaggctgattgat
gacttggaccaacatgtggatgttacagactccaggttacggcgggtgcaaaagaatttg
gctattttgaacaagcgcaccaaaggtggctgctcttgcatgtgcctgcttttgtcagtt
attgggatcgtggttctggttgctgtcatatacttattgatcaaatatttgtaa
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