Quercus lobata (valley oak): 115957994
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Entry
115957994 CDS
T07350
Name
(RefSeq) E3 SUMO-protein ligase MMS21
KO
K22756
E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qlo04121
]
115957994
03400 DNA repair and recombination proteins [BR:
qlo03400
]
115957994
Ubiquitin system [BR:
qlo04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
115957994
DNA repair and recombination proteins [BR:
qlo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
115957994
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GFIT
Motif
Pfam:
zf-Nse
zf-C3HC4_2
zf-MIZ
DNA_pol_A_exo1
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
115957994
NCBI-ProteinID:
XP_030932217
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All DBs
Position
8:complement(23695823..23709001)
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AA seq
253 aa
AA seq
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MASTSASRSSGGVSGRIRTAASTLYSDNQSLIAEIRKALNMMKEVAIDLERDNQSQMVKE
IENAAVELSGKYEQSTHFSTAIHSVADRYQLGPELTNFKKLFDDEIVNLKANSSSVPENH
PIIRQFREAIWNVHHAGQPMPGEEQEDIVMTTTQSNLLNVTCPLSGKPVTELAEPVRSVE
CKHVYEKKVVMVYIRSNARQCPVAGCPKILRADKIVCDPLLLIEIEEMRAMSKQSAPTSE
IEDCTALDEEEDD
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacctcggcttctcggtccagtggtggcgtcagtggcagaatcagaaccgca
gcttccacactctactccgacaatcagtccctcatcgctgaaattcgaaaggcattgaat
atgatgaaggaagttgcaattgatttggagagagataaccagtctcagatggtaaaggaa
attgaaaatgcagctgttgagttgtcgggtaaatatgaacagtctacacatttttcgaca
gcaattcattctgttgcagataggtatcagcttgggccagagttaaccaattttaagaaa
ctgtttgatgatgaaattgtgaatctcaaggctaattcatcttcagttccagaaaatcat
cctataatacgccagtttagagaagctatctggaatgttcatcatgcaggacagccaatg
ccaggcgaagagcaggaggacattgtaatgactactacccagtccaaccttttgaatgtc
acctgcccattaagtggaaagcctgttactgaactggcagaaccagttcgcagtgtggaa
tgcaagcatgtttatgaaaagaaggtagtcatggtctacattcggtcaaatgcccgtcaa
tgccctgttgcaggttgccctaagatattgcgggcagacaaaatagtatgtgacccattg
ttgctcattgaaattgaagaaatgcgtgctatgagtaaacaaagtgctccgacttcagag
atagaagattgtactgcgcttgatgaagaagaggatgactga
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