KEGG   Quercus lobata (valley oak): 115957994
Entry
115957994         CDS       T07350                                 
Name
(RefSeq) E3 SUMO-protein ligase MMS21
  KO
K22756  E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
Organism
qlo  Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:qlo04121]
    115957994
   03400 DNA repair and recombination proteins [BR:qlo03400]
    115957994
Ubiquitin system [BR:qlo04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   115957994
DNA repair and recombination proteins [BR:qlo03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    SMC5-SMC6 complex
     115957994
SSDB
Motif
Pfam: zf-Nse zf-C3HC4_2 zf-MIZ DNA_pol_A_exo1 zf-C3HC4
Other DBs
NCBI-GeneID: 115957994
NCBI-ProteinID: XP_030932217
LinkDB
Position
8:complement(23695823..23709001)
AA seq 253 aa
MASTSASRSSGGVSGRIRTAASTLYSDNQSLIAEIRKALNMMKEVAIDLERDNQSQMVKE
IENAAVELSGKYEQSTHFSTAIHSVADRYQLGPELTNFKKLFDDEIVNLKANSSSVPENH
PIIRQFREAIWNVHHAGQPMPGEEQEDIVMTTTQSNLLNVTCPLSGKPVTELAEPVRSVE
CKHVYEKKVVMVYIRSNARQCPVAGCPKILRADKIVCDPLLLIEIEEMRAMSKQSAPTSE
IEDCTALDEEEDD
NT seq 762 nt   +upstreamnt  +downstreamnt
atggcgtcgacctcggcttctcggtccagtggtggcgtcagtggcagaatcagaaccgca
gcttccacactctactccgacaatcagtccctcatcgctgaaattcgaaaggcattgaat
atgatgaaggaagttgcaattgatttggagagagataaccagtctcagatggtaaaggaa
attgaaaatgcagctgttgagttgtcgggtaaatatgaacagtctacacatttttcgaca
gcaattcattctgttgcagataggtatcagcttgggccagagttaaccaattttaagaaa
ctgtttgatgatgaaattgtgaatctcaaggctaattcatcttcagttccagaaaatcat
cctataatacgccagtttagagaagctatctggaatgttcatcatgcaggacagccaatg
ccaggcgaagagcaggaggacattgtaatgactactacccagtccaaccttttgaatgtc
acctgcccattaagtggaaagcctgttactgaactggcagaaccagttcgcagtgtggaa
tgcaagcatgtttatgaaaagaaggtagtcatggtctacattcggtcaaatgcccgtcaa
tgccctgttgcaggttgccctaagatattgcgggcagacaaaatagtatgtgacccattg
ttgctcattgaaattgaagaaatgcgtgctatgagtaaacaaagtgctccgacttcagag
atagaagattgtactgcgcttgatgaagaagaggatgactga

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