KEGG   Quercus lobata (valley oak): 115958122
Entry
115958122         CDS       T07350                                 
Name
(RefSeq) ras-related protein RABF1
  KO
K07887  Ras-related protein Rab-5A
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo04144  Endocytosis
qlo04145  Phagosome
qlo04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    115958122
   04145 Phagosome
    115958122
   04148 Efferocytosis
    115958122
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:qlo04131]
    115958122
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:qlo04147]
    115958122
   04031 GTP-binding proteins [BR:qlo04031]
    115958122
Membrane trafficking [BR:qlo04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    115958122
 Endosome - Lysosome transport
    115958122
Exosome [BR:qlo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115958122
  Exosomal proteins of other body fluids (saliva and urine)
   115958122
  Exosomal proteins of colorectal cancer cells
   115958122
  Exosomal proteins of bladder cancer cells
   115958122
GTP-binding proteins [BR:qlo04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    115958122
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase Gtr1_RagA GTP_EFTU MMR_HSR1 AAA_7 AAA_16 TniB
Other DBs
NCBI-GeneID: 115958122
NCBI-ProteinID: XP_030932347
UniProt: A0A7N2MF13
LinkDB
Position
8:complement(54754713..54760280)
AA seq 200 aa
MGCSSSLPDRSSGQLAGLNSENGGVSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT
SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITSPDS
FAKAQYWVKELQKHGSPDIVMALVGNKADLNEKREVPVQDGIDYAEKNGMFFIETSAKTA
DNINQLFEEIAKRLPRPASS
NT seq 603 nt   +upstreamnt  +downstreamnt
atgggttgctcctcttctcttccagacaggtcttccgggcagttggccgggctgaattca
gagaatggcggagtgtctgacgccaaaaatctccgtgtgaagctggtcttgttaggtgat
tctggtgttggtaaaagctgtattgttcttcgctttgttcgtggtcagtttgacccaact
tccaaggttactgttggagcttcattcttatcacagacaatagctttacaagactctaca
acagttaagtttgaaatatgggacactgctggccaagagaggtatgctgcattggcgcca
ctttactaccgaggtgctgcagttgcagttgttgtatatgatataacaagcccagactca
tttgccaaggcacaatattgggttaaggagctacaaaaacatggtagtcctgatatagtc
atggccttagtcggtaacaaagctgatcttaatgagaagcgcgaagtaccggttcaggat
ggcattgactatgcggagaagaatggaatgttttttattgagacatctgcaaagacagca
gataatataaatcagctgtttgaggaaattgccaagcgactaccccgcccggcctcttca
tga

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