Quercus lobata (valley oak): 115958175
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Entry
115958175 CDS
T07350
Name
(RefSeq) protein NEDD1
KO
K16547
protein NEDD1
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
qlo03036
]
115958175
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
qlo04812
]
115958175
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
115958175
Microtubules and associated factors
gamma-tubulin ring complex
115958175
Cytoskeleton proteins [BR:
qlo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
115958175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
EIF3I
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
Beta-prop_DCAF4
NYD-SP28_assoc
NBCH_WD40
PAN2_N
PsbK
bZIP_2
Motif
Other DBs
NCBI-GeneID:
115958175
NCBI-ProteinID:
XP_030932423
UniProt:
A0A7N2MH69
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Position
8:complement(61741273..61749806)
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AA seq
804 aa
AA seq
DB search
MNLSDPAMALLAASGGDTVKLFDVSVKAGDPCALTYTPSPGCLVNSVKWNHTNLVVASAG
DDKKISLWRKNGQSLGTIPVAGADSGDNIEESITAISFSNKVSRYICSGGSGQVVRIWDL
QRKRCIKWLRGHTNTITGAIYNCKDEHLASISLSGDLILHNLASGARAAELKDPNEQVLR
VLDYSRISRHLLVTAGDDGTVHLWDTTGRNPKVSWLKQHSAPTAGVSFSPSNDKIIASVG
LDKKLYTYDSGSRRPSSCIPYEAPFSSLAFRDDGWTLAAGTSNGRVVFYDVRGKPQPFVV
LHAYGSSEAVTSLCWQRSKPVIVNESNCTTETALVGNAVEDSILMPDPLPSVTSSSLSLS
TVVSSSRNLGRLGASMEASSLTATSSAFASSTLHTSTTEETPHRSHLRAGGTLARLQAPR
SSYNFKDDMEVFSPLVDVQPITPSLDKLWDDNEGIKKDHLLVDKRPPSLLFPSSTRRFPI
ADDSGNDHPIFDWKSSSTSKQDDTRSSFTILGSTPSPSSKSEDSSITPPEAWGGERLSDK
YTHLRQPIPLPSRFGTLASGGQSSGGSMFSGLQDLSSSTSQTSISSLTNSNFGYANFRAK
DVSSNQETSFGFPEHLTSSSTSLSLGTKGITGQTNLDLPGPASSTLPRRYSTYAERISTA
SSFSDGTSLSVVSPKLKKTGAETREELLNNLLAKSDTVAASELGILPSMNGVISQPQKAQ
QPDAQQGSSFTLQLFQRTLDETLDSFQKSIHEDMRNLHIEILRQFHMQEMEMSSVMSSIL
ENQAELMKEVKSLRKENQQLRQLL
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatcggatccagcaatggcgttattggcggcaagcggaggagacactgtgaag
ctcttcgatgtttcggtgaaggccggcgatccttgcgctttgacctacactccctctcct
ggttgcttagttaattcagtgaagtggaaccacaccaatttggttgtggcgagtgctgga
gatgataagaagatctcgttgtggcgtaagaatgggcagagcttggggacgattccggtg
gctggagcggatagcggcgacaacattgaggagtctataacggctatcagcttcagcaat
aaggtatccagatacatatgttctggtggaagtggtcaagttgtaagaatatgggatttg
cagaggaaacgatgtattaaatggctgagaggtcataccaatacaataacgggtgcaata
tacaactgcaaggatgaacacttggcttccataagtcttagtggggatctcatacttcac
aaccttgcatcaggtgcgagggctgctgaactcaaggatcccaatgaacaggtattgaga
gtgcttgattattcccggattagccgacaccttttggttactgctggtgatgatgggacc
gtacatttatgggatacgacaggtcgcaatccaaaggtttcttggttgaagcagcactca
gcaccaacagctggtgttagtttttcaccgtccaatgataagataattgctagtgttggt
ctggataaaaagttatacacgtatgactcagggtctagaaggccctcatcttgcattccc
tatgaggcgcctttctcgtcattggcttttagagatgatggctggactcttgcagctgga
acaagtaatggtcgggtggtattctatgatgtccgtggaaaaccacagccctttgtagtt
ctccatgcttatggtagttcagaggctgttacaagtttatgctggcagagatcaaaacct
gttatcgtaaatgaaagtaattgcactactgagactgctcttgtaggaaatgctgttgaa
gactcaattcttatgcctgacccacttccttctgtgacttcatcgagcctttctctgtct
acagtagtatccagttctcgaaatttgggccgattgggtgcctccatggaagcatcttca
cttacagcaaccagcagtgcatttgcatctagcacactccatacgtctaccacagaggaa
acaccacatcgaagccatttaagggcaggtggtacattggcaaggttacaagctcctcgt
tctagttataacttcaaggatgatatggaagtgttttcccctcttgtggatgttcagcca
ataacaccctcacttgacaagctgtgggatgacaatgaaggaatcaagaaggatcatcta
cttgtagataagaggcctccatcactgttgtttccttcatccaccaggagattccctatt
gcagatgatagtggcaatgaccatccaatatttgattggaaatccagctcaacttccaaa
caggatgacacccgatcttcctttacaattttgggttcaactcctagtccatcttcaaaa
agtgaagactcctctatcactcctccagaagcttggggtggtgagagattgtctgataaa
tatactcacctacgtcagccaattcctttgccatctcgttttgggaccttggcctctggt
ggccagtcatcaggagggtcaatgtttagtggattacaagatctgtcctcatcaacaagt
cagactagtattagctccttgacaaactcaaactttggttatgcgaattttcgcgccaaa
gatgtctcttcaaatcaggagacatcatttggatttcccgaacacttaacctctagttcc
acatctctgtcccttggtacaaaaggcatcaccggacagactaaccttgatttgccaggg
ccagcatcttcgaccctgcctcgaagatattctacttacgcagagagaataagcacagcg
tcttctttcagtgacggcacatctctttcagtagtttctccaaaattgaagaaaacagga
gctgaaaccagggaagaacttttgaataacttgttggcaaaatccgatacagtggctgct
tcggaactaggaattcttccatcaatgaatggagtaatctcacaaccccaaaaggcccag
caaccagatgcacagcagggatcctcctttacacttcagctttttcaacgcactcttgat
gaaactcttgattcctttcagaaatccatacacgaagatatgaggaaccttcatattgaa
attctaagacaatttcatatgcaggagatggagatgtcaagcgtaatgagctcaattttg
gaaaaccaagcggaattaatgaaagaagttaaatcactccggaaagaaaaccagcagctc
cggcaattgctgtaa
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