Quercus lobata (valley oak): 115958196
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Entry
115958196 CDS
T07350
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo00040
Pentose and glucuronate interconversions
qlo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115958196
Enzymes [BR:
qlo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
115958196
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
115958196
NCBI-ProteinID:
XP_030932449
UniProt:
A0A7N2MDW5
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Position
8:57759051..57763205
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AA seq
331 aa
AA seq
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MASLPYADVDSSLRALAGRAEGFGRFAIGGLDGPIYCVTTLADDGPGSLREGCHKKEPLW
IVFEVSGTLHLSSYLNVSSYKTIDGRGQRIKLTGKGLRLKECEHIIICNLEFEGGRGHDV
DGIQIKPNSKHIWIDRCSLRDYDDGLIDITRQSTDITISRCYFAQHDKTMLIGADPTHVG
DRCIRVTIHHCFFDGTRQRHPRVRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA
GQKKKSFEYYTEKAADREEVKSGLIRSEGDLFLNGAQAYLSTVANEECVFHPSEFYLTWT
MEAPSDSLKDILQICTGWQSIPRPVEQMVIG
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccctaccttacgctgacgtggattcgagtctcagagctctggcgggtcgggca
gaggggttcggtcggttcgcgatcggaggcctcgacggtcccatctattgcgtcaccact
ctcgcagatgatggtccaggatcccttcgtgaaggttgccataaaaaagagccactatgg
atagtttttgaagtttctggtactcttcatctttcttcttacttgaacgtgtcgtcttat
aagacaatcgatggccggggtcaaaggataaagctcaccggcaaaggcttaaggctgaag
gaatgtgaacacataatcatatgcaaccttgagtttgaaggtggtagaggacatgatgtt
gatggtattcaaataaaaccaaattcaaagcacatatggatagaccgctgcagcctccgt
gattatgatgatggacttatagatatcactagacaaagcacagatataactatttctaga
tgttactttgcacaacatgacaagacaatgcttattggggcagaccccactcacgttggt
gatagatgcattcgggtaacaattcatcattgtttctttgatgggactcgccaaaggcac
cctcgtgttagatttggaaaagttcatctatacaacaattacaccagaaactggggtata
tatgctgtttgtgccagtgtagaatctcagatatactctcaatgcaacatatatgaagca
ggacagaagaaaaagtcttttgaatattatacagagaaggcagcagatcgggaagaggta
aaatctggcttaataagatctgaaggagacttgttcctgaatggggctcaagcttactta
tcaacagtggccaacgaagaatgtgtgttccacccaagtgaattctacctgacatggaca
atggaagcaccctcagattctcttaaagatattctccaaatttgtacaggttggcaatcc
attcccaggccagtggagcagatggtaattggatag
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